RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 DICER1Q9UPY3 1922 aaKnown RBP8.72□□□□□ -1.01
SYNE1-211ENST00000413186 hCG_1818297A0A087WSY0 165 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 UBA6A0AVT1 1052 aaPredicted RBP8.72□□□□□ -1.01
SYNE1-211ENST00000413186 MTMR11A4FU01 709 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 RASA4BC9J798 803 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 RNF103O00237 685 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 FSCN2O14926 492 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 RASA4O43374 803 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 OAZ2O95190 189 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 CRTAMO95727 393 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 CYP11A1P05108 521 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 MSR1P21757 451 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 CES1P23141 567 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 BMPR1AP36894 532 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 SCNN1BP51168 640 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 HNRNPH2P55795 449 aaKnown RBP8.72□□□□□ -1.01
SYNE1-211ENST00000413186 FAAP100Q0VG06 881 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 GRSF1Q12849 480 aaKnown RBP eCLIP8.72□□□□□ -1.01
SYNE1-211ENST00000413186 AARS2Q5JTZ9 985 aaKnown RBP8.72□□□□□ -1.01
SYNE1-211ENST00000413186 TPGS1Q6ZTW0 290 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 ANKMY2Q8IV38 441 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 PTPRN2Q92932 1015 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 TRIM54Q9BYV2 358 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 SDCBP2Q9H190 292 aa8.72□□□□□ -1.01
SYNE1-211ENST00000413186 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.72□□□□□ -1.01
SYNE1-211ENST00000413186 TBL1XO60907 577 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 MMP13P45452 471 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 WDR5P61964 334 aaKnown RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 SULT2A1Q06520 285 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 KRT33BQ14525 404 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 CREG2Q8IUH2 290 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 KLHL23Q8NBE8 558 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 ARHGEF2Q92974 986 aaKnown RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 TOP1MTQ969P6 601 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 ZNF669Q96BR6 464 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 CHMP6Q96FZ7 201 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 SGSM3Q96HU1 749 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 RILPQ96NA2 401 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 HERC2P3Q9BVR0 1158 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 MRPS26Q9BYN8 205 aaKnown RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 CHMP2BQ9UQN3 213 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 YJEFN3A6XGL0 299 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 E7ENQ6 273 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 ACSL4O60488 711 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 CDH5P33151 784 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 SPRP35270 261 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 TAS2R40P59535 323 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 POLR2LP62875 67 aaKnown RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 DSC3Q14574 896 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 HP1BP3Q5SSJ5 553 aaPredicted RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 WDR75Q8IWA0 830 aaKnown RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 OVCA2Q8WZ82 227 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 SUSD6Q92537 303 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 B3GALT6Q96L58 329 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 C9orf72Q96LT7 481 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 BBS2Q9BXC9 721 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 ZCWPW1Q9H0M4 648 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 EPN3Q9H201 632 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 PABPC3Q9H361 631 aaKnown RBP8.71□□□□□ -1.01
SYNE1-211ENST00000413186 SCML2Q9UQR0 700 aa8.71□□□□□ -1.01
SYNE1-211ENST00000413186 TBC1D3BA6NDS4 549 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 M0QZQ0 153 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 DDHD2O94830 711 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 RHOQP17081 205 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 EN2P19622 333 aaPredicted RBP8.71□□□□□ -1.02
SYNE1-211ENST00000413186 TYK2P29597 1187 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 CORO1AP31146 461 aaKnown RBP8.71□□□□□ -1.02
SYNE1-211ENST00000413186 MAGEA9P43362 315 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 ZNF132P52740 706 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 CDH17Q12864 832 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 CLLU1OSQ5K130 101 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 MRNIPQ6NTE8 343 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 NLRP14Q86W24 1093 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 NIPA2Q8N8Q9 360 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 NTAN1Q96AB6 310 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 PRKD2Q9BZL6 878 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 CRTAC1Q9NQ79 661 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 KIAA1522Q9P206 1035 aaPredicted RBP8.71□□□□□ -1.02
SYNE1-211ENST00000413186 FAM153AQ9UHL3 310 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 CNTN6Q9UQ52 1028 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 KIAA0355O15063 1070 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 GOT1P17174 413 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 PARP6Q2NL67 630 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 TAC4Q86UU9 113 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 CPA6Q8N4T0 437 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 TEX9Q8N6V9 391 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 SERPINB12Q96P63 405 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 ZIM3Q96PE6 472 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 ARHGEF38Q9NXL2 777 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 MTRRQ9UBK8 725 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 DNPEPQ9ULA0 475 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 INSL5Q9Y5Q6 135 aa8.71□□□□□ -1.02
SYNE1-211ENST00000413186 A0A0A0MRY4 1105 aa8.7□□□□□ -1.02
SYNE1-211ENST00000413186 DNALI1O14645 258 aaPredicted RBP8.7□□□□□ -1.02
SYNE1-211ENST00000413186 GJB5O95377 273 aa8.7□□□□□ -1.02
SYNE1-211ENST00000413186 PYGLP06737 847 aa8.7□□□□□ -1.02
SYNE1-211ENST00000413186 BRAFP15056 766 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms