RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 OSGEPQ9NPF4 335 aa9.92□□□□□ -0.82
SOX9-AS1-201ENST00000412640 KIAA1257Q9ULG3 409 aa9.92□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CREBBPQ92793 2442 aa9.92□□□□□ -0.82
SOX9-AS1-201ENST00000412640 OBSL1O75147 1896 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CABIN1Q9Y6J0 2220 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 A0A0A0MRY4 1105 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TRAV19A0A0A6YYK7 116 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PDE2AO00408 941 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PIRO00625 290 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZBTB24O43167 697 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 KLK10O43240 276 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SRGAP2O75044 1071 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 FAM163BP0C2L3 166 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 HAPLN1P10915 354 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 NCAM1P13591 858 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 LRPAP1P30533 357 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 GRIA2P42262 883 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TNFRSF4P43489 277 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 NSFP46459 744 aaKnown RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 RAD23BP54727 409 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZXDBP98169 803 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 IL9RQ01113 521 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SERINC3Q13530 473 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 NAA30Q147X3 362 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 DHCR24Q15392 516 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ERCC6LQ2NKX8 1250 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 KIF19Q2TAC6 998 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 C9orf57Q5W0N0 161 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PEX26Q7Z412 305 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 DAAM2Q86T65 1068 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MIB1Q86YT6 1006 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ADGRG2Q8IZP9 1017 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 RASGEF1CQ8N431 466 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SLC4A11Q8NBS3 891 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MSANTD4Q8NCY6 345 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 COG1Q8WTW3 980 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MMS19Q96T76 1030 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZSWIM1Q9BR11 485 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 GDAP2Q9NXN4 497 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ABI2Q9NYB9 513 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 EIF2B4Q9UI10 523 aaKnown RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 AMFRQ9UKV5 643 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 HCN2Q9UL51 889 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TTC7AQ9ULT0 858 aaPredicted RBP9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SNX11Q9Y5W9 270 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MYLKQ15746 1914 aa9.91□□□□□ -0.82
SOX9-AS1-201ENST00000412640 BOD1L1Q8NFC6 3051 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 C2orf78A6NCI8 922 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TBC1D3BA6NDS4 549 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MIF4GDA9UHW6 222 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZNF185O15231 689 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MED7O43513 233 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 RFPL3O75679 317 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CALCAP01258 141 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TUBBP07437 444 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 H2AFXP16104 143 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CD58P19256 250 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MMP8P22894 467 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CD6P30203 668 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PNPLA4P41247 253 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 GUCY2FP51841 1108 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 GSCP56915 257 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 RIPPLY3P57055 190 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PCBP4P57723 403 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 DCAF12L1Q5VU92 463 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 NAA35Q5VZE5 725 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PLEKHA7Q6IQ23 1121 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 FBXL19Q6PCT2 694 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 KIAA1324Q6UXG2 1013 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SCARA5Q6ZMJ2 495 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 LRRTM3Q86VH5 581 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MMGT1Q8N4V1 131 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 WDTC1Q8N5D0 677 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TMEM35BQ8NCS4 154 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZNF564Q8TBZ8 553 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ACTRT1Q8TDG2 376 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 IPO4Q8TEX9 1081 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CPA5Q8WXQ8 436 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TFAP2BQ92481 460 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZNF653Q96CK0 615 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TOE1Q96GM8 510 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ACOX2Q99424 681 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 NUP85Q9BW27 656 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ELOVL4Q9GZR5 314 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ZCWPW1Q9H0M4 648 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SMYD3Q9H7B4 428 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 CNOT8Q9UFF9 292 aaKnown RBP9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 LCMT1Q9UIC8 334 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 MAN2B2Q9Y2E5 1009 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 PCDHGA1Q9Y5H4 931 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 ALG6Q9Y672 507 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 SLCO1B1Q9Y6L6 691 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 FBN2P35556 2912 aa9.9□□□□□ -0.82
SOX9-AS1-201ENST00000412640 TCRBV5S1A1TA0A578 114 aa9.89□□□□□ -0.83
SOX9-AS1-201ENST00000412640 PPEF2O14830 753 aa9.89□□□□□ -0.83
SOX9-AS1-201ENST00000412640 DDX3YO15523 660 aaKnown RBP9.89□□□□□ -0.83
SOX9-AS1-201ENST00000412640 SUV39H1O43463 412 aa9.89□□□□□ -0.83
SOX9-AS1-201ENST00000412640 VDRP11473 427 aa9.89□□□□□ -0.83
SOX9-AS1-201ENST00000412640 HDCP19113 662 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms