RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 RFC1P35251 1148 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 ADRA1BP35368 520 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 PBX1P40424 430 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 ZNF143P52747 638 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 ATP11AP98196 1134 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 AASDHQ4L235 1098 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 WDR45BQ5MNZ6 344 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 PEAR1Q5VY43 1037 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 ZNF776Q68DI1 518 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 CXorf57Q6NSI4 855 aaKnown RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 DCUN1D2Q6PH85 259 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 ERMP1Q7Z2K6 904 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 FAM131BQ86XD5 332 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 TMEFF1Q8IYR6 380 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 EMC1Q8N766 993 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 NTAN1Q96AB6 310 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 MRGPRX3Q96LB0 322 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 NCAPGQ9BPX3 1015 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 C2orf49Q9BVC5 232 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 ADAM33Q9BZ11 813 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 ZYG11BQ9C0D3 744 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 HAUS4Q9H6D7 363 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 PRSS16Q9NQE7 514 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 WSB2Q9NYS7 404 aaPredicted RBP16.67■□□□□ 0.26
DDR1-230ENST00000412274 SUSD2Q9UGT4 822 aa16.67■□□□□ 0.26
DDR1-230ENST00000412274 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDR1-230ENST00000412274 MUC22E2RYF6 1773 aaPredicted RBP16.66■□□□□ 0.26
DDR1-230ENST00000412274 GPR179Q6PRD1 2367 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 HLA-EP13747 358 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 ETFBP38117 255 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 TPMTP51580 245 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 ZBED6P86452 979 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 ZNF33AQ06730 810 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 RSPO4Q2I0M5 234 aaPredicted RBP16.66■□□□□ 0.26
DDR1-230ENST00000412274 RALGAPA1Q6GYQ0 2036 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 TRNP1Q6NT89 227 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 WDR59Q6PJI9 974 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 USP30Q70CQ3 517 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 ZNF683Q8IZ20 524 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 APCDD1Q8J025 514 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 MYO19Q96H55 970 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 CNPY3Q9BT09 278 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 NUSAP1Q9BXS6 441 aaKnown RBP16.66■□□□□ 0.26
DDR1-230ENST00000412274 MUC3BQ9H195 1237 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 RSPH9Q9H1X1 276 aaPredicted RBP16.66■□□□□ 0.26
DDR1-230ENST00000412274 OR12D3Q9UGF7 316 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 CAPN11Q9UMQ6 739 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 NCKAP1Q9Y2A7 1128 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 THADAQ6YHU6 1953 aa16.66■□□□□ 0.26
DDR1-230ENST00000412274 WDR87Q6ZQQ6 2873 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 TCRBV5S1A1TA0A578 114 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 ILVBLA1L0T0 632 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 RTN2O75298 545 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 RHOCP08134 193 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 MYBL1P10243 752 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 OR1E1P30953 314 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 ELAVL3Q14576 367 aaKnown RBP16.65■□□□□ 0.26
DDR1-230ENST00000412274 CDO1Q16878 200 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 DUOXA1Q1HG43 343 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 PPP1R15BQ5SWA1 713 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 DSG4Q86SJ6 1040 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 C14orf80Q86SX3 495 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 JOSD2Q8TAC2 188 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 FAM172AQ8WUF8 416 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 PIGKQ92643 395 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 ALG14Q96F25 216 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 TOE1Q96GM8 510 aaKnown RBP16.65■□□□□ 0.26
DDR1-230ENST00000412274 TSPY26PQ9H489 355 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 SGK2Q9HBY8 427 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 DONSONQ9NYP3 566 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 VPS28Q9UK41 221 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 PILRBQ9UKJ0 227 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 TPX2Q9ULW0 747 aaKnown RBP16.65■□□□□ 0.26
DDR1-230ENST00000412274 LUC7L2Q9Y383 392 aaKnown RBP16.65■□□□□ 0.26
DDR1-230ENST00000412274 FARP1Q9Y4F1 1045 aaPredicted RBP16.65■□□□□ 0.26
DDR1-230ENST00000412274 OR51B4Q9Y5P0 310 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.65■□□□□ 0.26
DDR1-230ENST00000412274 SCINQ9Y6U3 715 aa16.65■□□□□ 0.26
DDR1-230ENST00000412274 EIF3CLB5ME19 914 aaKnown RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 SLC30A4O14863 429 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 ATP9BO43861 1147 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 SRGAP2O75044 1071 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 SERPING1P05155 500 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 GNSP15586 552 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 MZF1P28698 734 aaPredicted RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 HTR7P34969 479 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 CLCN6P51797 869 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 ATXN1P54253 815 aaKnown RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 RPS14P62263 151 aaKnown RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 SLC20A2Q08357 652 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 SCAPQ12770 1279 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 TRIM14Q14142 442 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 C15orf59Q2T9L4 293 aaPredicted RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 C9orf64Q5T6V5 341 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 PLEKHA7Q6IQ23 1121 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 SLC23A3Q6PIS1 610 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 SLFN11Q7Z7L1 901 aa16.64■□□□□ 0.25
DDR1-230ENST00000412274 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.25
DDR1-230ENST00000412274 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms