RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 PAFAH2Q99487 392 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 WDR83Q9BRX9 315 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TRPV6Q9H1D0 765 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TRABDQ9H4I3 376 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TMEM30AQ9NV96 361 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 IGSF9Q9P2J2 1179 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ZNF180Q9UJW8 692 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CHMP2BQ9UQN3 213 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 FAM169AQ9Y6X4 670 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TCRBV9S1A1TA0A576 114 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 I3L4J1 428 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 AP3B1O00203 1094 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TM9SF1O15321 606 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 MFSD11O43934 449 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ZWINTO95229 277 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 INHBAP08476 426 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ERCC2P18074 760 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PRKCHP24723 683 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 MSX1P28360 303 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 MAGEA11P43364 429 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CACNA2D1P54289 1103 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CORO7P57737 925 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 YWHAGP61981 247 aaKnown RBP eCLIP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PITX1P78337 314 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 COG7P83436 770 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 GAD2Q05329 585 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 PPIDQ08752 370 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ELAVL2Q12926 359 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 EIF4EBP2Q13542 120 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SPARCL1Q14515 664 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 MBTPS1Q14703 1052 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CLLU1OSQ5K130 101 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ACBD5Q5T8D3 534 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ZNF449Q6P9G9 518 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 C6orf89Q6UWU4 347 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 RTN4RL1Q86UN2 441 aaPredicted RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CAND1Q86VP6 1230 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ABI1Q8IZP0 508 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 LZTR1Q8N653 840 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 CCDC197Q8NCU1 140 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SLC44A1Q8WWI5 657 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 HDAC11Q96DB2 347 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 P2RY11Q96G91 374 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SEC16BQ96JE7 1060 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 C8orf48Q96LL4 319 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 HAPLN3Q96S86 360 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 EBNA1BP2Q99848 306 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ZCWPW1Q9H0M4 648 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 FBXO44Q9H4M3 255 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TBC1D13Q9NVG8 400 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SAGE1Q9NXZ1 904 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 FNIP2Q9P278 1114 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 ZC3H7BQ9UGR2 993 aaKnown RBP7.7□□□□□ -1.18
CXCR4-202ENST00000409817 TRHDEQ9UKU6 1024 aa7.7□□□□□ -1.18
CXCR4-202ENST00000409817 SYNJ2BP-COX16A0A087WUM0 186 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 OR6C75A6NL08 312 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 TTLL8A6PVC2 850 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 RNF103O00237 685 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 DNM1LO00429 736 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 FGF10O15520 208 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 IRAK2O43187 625 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 METTL18O95568 372 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 CPP00450 1065 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 APOEP02649 317 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 VIMP08670 466 aaKnown RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 VAV1P15498 845 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 YY1P25490 414 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 CDK7P50613 346 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 SLC5A3P53794 718 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 NRG1Q02297 640 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 AP1B1Q10567 949 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 MTA1Q13330 715 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 NAB1Q13506 487 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 PPP2R5DQ14738 602 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 PKN2Q16513 984 aaKnown RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 PAN2Q504Q3 1202 aaKnown RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 HP1BP3Q5SSJ5 553 aaPredicted RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 BTBD8Q5XKL5 378 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 ALG1LQ6GMV1 187 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 ITPRIPL1Q6GPH6 555 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 LRRC8BQ6P9F7 803 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 LRRC69Q6ZNQ3 347 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 LRRTM3Q86VH5 581 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 TAX1BP1Q86VP1 789 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 SLC26A11Q86WA9 606 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 LRRC6Q86X45 466 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 LRRC49Q8IUZ0 686 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 OTUD6BQ8N6M0 293 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 COLGALT1Q8NBJ5 622 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 GSDMBQ8TAX9 411 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 DQX1Q8TE96 717 aaKnown RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 DENND1AQ8TEH3 1009 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 DCAKDQ8WVC6 231 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 LINC01599Q8WXQ3 324 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 SEPT8Q92599 483 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 MTBPQ96DY7 904 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 PPP1R2P1Q96PQ5 205 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 MRPL9Q9BYD2 267 aaKnown RBP7.69□□□□□ -1.18
CXCR4-202ENST00000409817 TKTL2Q9H0I9 626 aa7.69□□□□□ -1.18
CXCR4-202ENST00000409817 SMOC2Q9H3U7 446 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms