RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 TWSG1Q9GZX9 223 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 ALDH8A1Q9H2A2 487 aaPredicted RBP6.71□□□□□ -1.34
LSM5-203ENST00000409782 FAM83DQ9H4H8 585 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 CLIC5Q9NZA1 410 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 IFT80Q9P2H3 777 aaPredicted RBP6.71□□□□□ -1.34
LSM5-203ENST00000409782 POLG2Q9UHN1 485 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 MID2Q9UJV3 735 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 SNX14Q9Y5W7 946 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 ADAMTS20P59510 1910 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 GRIN2DO15399 1336 aa6.71□□□□□ -1.34
LSM5-203ENST00000409782 TANC1Q9C0D5 1861 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 A0A1B0GTL3 188 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 LOC102723971A0A1B0GUV8 181 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MYO1CO00159 1063 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MEIS2O14770 477 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 PIP5K1BO14986 540 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 FIBPO43427 364 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 ZNF500O60304 480 aaPredicted RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 B4GALT4O60513 344 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 TRIM13O60858 407 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 RAP2AP10114 183 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MYCLP12524 364 aaPredicted RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 RPS6KB1P23443 525 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 ITGB8P26012 769 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 RPL13P26373 211 aaKnown RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 ICAM3P32942 547 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 KCNC1P48547 511 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 METAP2P50579 478 aaKnown RBP eCLIP6.7□□□□□ -1.34
LSM5-203ENST00000409782 UCP3P55916 312 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 PSMC6P62333 389 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 APBA1Q02410 837 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 DLX2Q07687 328 aaPredicted RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 NSUN2Q08J23 767 aaKnown RBP eCLIP6.7□□□□□ -1.34
LSM5-203ENST00000409782 MRPL49Q13405 166 aaKnown RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 SLC29A2Q14542 456 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 SPATA1Q5VX52 437 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MFSD5Q6N075 450 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MRNIPQ6NTE8 343 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 PSRC1Q6PGN9 363 aaPredicted RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 CPOQ8IVL8 374 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 CMTM4Q8IZR5 234 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 TMEM199Q8N511 208 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 TP53I13Q8NBR0 393 aaPredicted RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 MOGAT1Q96PD6 335 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 PRPF18Q99633 342 aaKnown RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 MRI1Q9BV20 369 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 AGXT2Q9BYV1 514 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 CPEB1Q9BZB8 566 aaKnown RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 TINAGL1Q9GZM7 467 aaPredicted RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 GLT8D2Q9H1C3 349 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 HIPK3Q9H422 1215 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 PSTPIP2Q9H939 334 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MSL2Q9HCI7 577 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 SLAMF7Q9NQ25 335 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 PRDM8Q9NQV8 689 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 BLOC1S4Q9NUP1 217 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 MTO1Q9Y2Z2 717 aaKnown RBP6.7□□□□□ -1.34
LSM5-203ENST00000409782 DTNAQ9Y4J8 743 aa6.7□□□□□ -1.34
LSM5-203ENST00000409782 ESYT2A0FGR8 921 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 OR2W5A6NFC9 320 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 A6NLC8 198 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 CXorf49A8MYA2 514 aaPredicted RBP6.69□□□□□ -1.34
LSM5-203ENST00000409782 B5MCH6 92 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 ASNA1O43681 348 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 TNFRSF6BO95407 300 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 GGPS1O95749 300 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 CASTP20810 708 aaKnown RBP6.69□□□□□ -1.34
LSM5-203ENST00000409782 SLC6A4P31645 630 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 PNLIPRP1P54315 467 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 EPHB4P54760 987 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 NAPAP54920 295 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 SLURP1P55000 103 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 EVCP57679 992 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 HGFACQ04756 655 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 TRPC3Q13507 836 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 NFYCQ13952 458 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 NEDD9Q14511 834 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 SHHQ15465 462 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 LY6KQ17RY6 165 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 FBLN7Q53RD9 439 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 ZMAT1Q5H9K5 638 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 C9orf50Q5SZB4 431 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 CELF3Q5SZQ8 465 aaKnown RBP6.69□□□□□ -1.34
LSM5-203ENST00000409782 RRAGBQ5VZM2 374 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 KLHL17Q6TDP4 642 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 METTL7BQ6UX53 244 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 PPP1R32Q7Z5V6 425 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 ZDHHC14Q8IZN3 488 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 SLC15A4Q8N697 577 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 FBXO18Q8NFZ0 1043 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 BORCS6Q96GS4 357 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 CDHR1Q96JP9 859 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 SPATA33Q96N06 139 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 SERINC2Q96SA4 455 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 PPP1R9BQ96SB3 815 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 TREX2Q9BQ50 279 aaPredicted RBP6.69□□□□□ -1.34
LSM5-203ENST00000409782 TM6SF1Q9BZW5 370 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 TRPV6Q9H1D0 765 aa6.69□□□□□ -1.34
LSM5-203ENST00000409782 MTIF3Q9H2K0 278 aaKnown RBP6.69□□□□□ -1.34
LSM5-203ENST00000409782 PABPC3Q9H361 631 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms