RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 HS3ST4Q9Y661 456 aa14.98□□□□□ -0.01
NIF3L1-205ENST00000409588 GON4LQ3T8J9 2241 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 TNRC6BQ9UPQ9 1833 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 SYNJ2BP-COX16A0A087WUM0 186 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 PAGE1O75459 146 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 SEMA4FO95754 770 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 ADH1BP00325 375 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 ZNF883P0CG24 379 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 PNMA6AP0CW24 399 aaPredicted RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 MAPK8P45983 427 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 AFF3P51826 1226 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 JAM2P57087 298 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 RNASE9P60153 205 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 POLR2FP61218 127 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 PITX1P78337 314 aaPredicted RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 KRT83P78385 493 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 DEUP1Q05D60 604 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 FAM102AQ5T9C2 384 aaPredicted RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 PSAPL1Q6NUJ1 521 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 DSG4Q86SJ6 1040 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 SETD3Q86TU7 594 aaPredicted RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 NEK11Q8NG66 645 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 ERLEC1Q96DZ1 483 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 MYEOVQ96EZ4 313 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 FEM1AQ9BSK4 669 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 GTPBP2Q9BX10 602 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 TKTL2Q9H0I9 626 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 GANQ9H2C0 597 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 PABPC3Q9H361 631 aaKnown RBP14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 COX16Q9P0S2 106 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 ADAMTS1Q9UHI8 967 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 TMEM59LQ9UK28 342 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 ANGPTL2Q9UKU9 493 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 CEP192Q8TEP8 1941 aa14.97□□□□□ -0.01
NIF3L1-205ENST00000409588 PI4KAP42356 2102 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ATXN2Q99700 1313 aaKnown RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CNOT1A5YKK6 2376 aaKnown RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CXorf51AA0A1B0GTR3 108 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 LRRC72A6NJI9 287 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 DRGXA6NNA5 263 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 SIN3BO75182 1162 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ENDOD1O94919 500 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CYP1A1P04798 512 aaPredicted RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 C5AR1P21730 350 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 MMP8P22894 467 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 PMLP29590 882 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ACSL1P33121 698 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 COPB1P53618 953 aaKnown RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 NOMO3P69849 1222 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CCDC15Q0P6D6 951 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ELAVL3Q14576 367 aaKnown RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 TEAD4Q15561 434 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CST6Q15828 149 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 TAF3Q5VWG9 929 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 FAM46CQ5VWP2 391 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 PPP1R2P3Q6NXS1 205 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ZNF783Q6ZMS7 281 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 PIP4P1Q86T03 277 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 APCDD1Q8J025 514 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 MINDY1Q8N5J2 469 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 C1orf216Q8TAB5 229 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CPA5Q8WXQ8 436 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 SKA1Q96BD8 255 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ERGIC2Q96RQ1 377 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 OMDQ99983 421 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 KDM4CQ9H3R0 1056 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 CD93Q9NPY3 652 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 FAM207AQ9NSI2 230 aaPredicted RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 PIGVQ9NUD9 493 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 FBXL12Q9NXK8 326 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 SLCO3A1Q9UIG8 710 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 SLC25A13Q9UJS0 675 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 NOCTQ9UK39 431 aaKnown RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 VANGL2Q9ULK5 521 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 SIK3Q9Y2K2 1263 aa14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.96□□□□□ -0.01
NIF3L1-205ENST00000409588 SMTNL1A8MU46 457 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 LGALS16A8MUM7 142 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 ALOX15BO15296 676 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 ATP9BO43861 1147 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 DFNA5O60443 496 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 GFPT2O94808 682 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 TRIM16O95361 564 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 CER1O95813 267 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 MMEP08473 750 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 PDGFRAP16234 1089 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 ZNF18P17022 549 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 GOT1P17174 413 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 CD27P26842 260 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 MAOBP27338 520 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 SLC8A1P32418 973 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 SULT1E1P49888 294 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 UBXN1Q04323 297 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 SYCP1Q15431 976 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 ARL13BQ3SXY8 428 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 C6orf118Q5T5N4 469 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 CXorf57Q6NSI4 855 aaKnown RBP14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 MMS22LQ6ZRQ5 1243 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 BNIPLQ7Z465 357 aa14.95□□□□□ -0.02
NIF3L1-205ENST00000409588 FAM124AQ86V42 546 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms