RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PRICKLE2Q7Z3G6 844 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 FAM186BQ8IYM0 893 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 CEP57L1Q8IYX8 460 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 CFAP52Q8N1V2 620 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 OR4C6Q8NH72 309 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 UBA3Q8TBC4 463 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 PTPRN2Q92932 1015 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 ZNF396Q96N95 335 aaPredicted RBP17.26■□□□□ 0.35
CHMP3-203ENST00000409225 DPH1Q9BZG8 443 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
CHMP3-203ENST00000409225 UCKL1Q9NWZ5 548 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 FAM13BQ9NYF5 915 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 HESX1Q9UBX0 185 aa17.26■□□□□ 0.35
CHMP3-203ENST00000409225 NYNRINQ9P2P1 1898 aaKnown RBP17.25■□□□□ 0.35
CHMP3-203ENST00000409225 A0A1B0GVM2 712 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 YEATS4O95619 227 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 MYF5P13349 255 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 VAV1P15498 845 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 DGKAP23743 735 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 NR2F2P24468 414 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 STK19P49842 368 aaPredicted RBP17.25■□□□□ 0.35
CHMP3-203ENST00000409225 DAOAP59103 153 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 OVGP1Q12889 678 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 APCDD1Q8J025 514 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 ASCL3Q9NQ33 180 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 THSD1Q9NS62 852 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 SERTAD1Q9UHV2 236 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 DMTF1Q9Y222 760 aa17.25■□□□□ 0.35
CHMP3-203ENST00000409225 PIK3R2O00459 728 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 CKMT1AP12532 417 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 CD19P15391 556 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 ELAVL3Q14576 367 aaKnown RBP17.24■□□□□ 0.35
CHMP3-203ENST00000409225 SGO2Q562F6 1265 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 KRT39Q6A163 491 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 SNRNP27Q8WVK2 155 aaKnown RBP17.24■□□□□ 0.35
CHMP3-203ENST00000409225 KLHDC7BQ96G42 594 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 MYOCQ99972 504 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 DDX50Q9BQ39 737 aaKnown RBP17.24■□□□□ 0.35
CHMP3-203ENST00000409225 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
CHMP3-203ENST00000409225 CAAP1Q9H8G2 361 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 CNGB3Q9NQW8 809 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 TRAF3IP3Q9Y228 551 aa17.24■□□□□ 0.35
CHMP3-203ENST00000409225 PRAMEF26H0Y7S4 382 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 PLRG1O43660 514 aaKnown RBP17.23■□□□□ 0.35
CHMP3-203ENST00000409225 LUC7L3O95232 432 aaKnown RBP17.23■□□□□ 0.35
CHMP3-203ENST00000409225 THEGLP0DJG4 465 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 NUDT1P36639 197 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 RGS7P49802 495 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 SETMARQ53H47 684 aaPredicted RBP17.23■□□□□ 0.35
CHMP3-203ENST00000409225 DCAF6Q58WW2 860 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 MS4A13Q5J8X5 152 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 C3orf38Q5JPI3 329 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 TRIM69Q86WT6 500 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 KCTD13Q8WZ19 329 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 AZIN2Q96A70 460 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 PAGE5Q96GU1 130 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 TRIM4Q9C037 500 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 ABCG4Q9H172 646 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 KDM4CQ9H3R0 1056 aa17.23■□□□□ 0.35
CHMP3-203ENST00000409225 K7ENP7 123 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 SLC7A4O43246 635 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 MOCS2O96007 188 aaPredicted RBP17.22■□□□□ 0.35
CHMP3-203ENST00000409225 LTFP02788 710 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 PSMC2P35998 433 aaKnown RBP17.22■□□□□ 0.35
CHMP3-203ENST00000409225 MXI1P50539 228 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 KCNMA1Q12791 1236 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 INO80CQ6PI98 192 aaPredicted RBP17.22■□□□□ 0.35
CHMP3-203ENST00000409225 SCML4Q8N228 414 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 CLEC4CQ8WTT0 213 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 KLK6Q92876 244 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 FAM131CQ96AQ9 280 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 FAXDC2Q96IV6 333 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 FCRL2Q96LA5 508 aaPredicted RBP17.22■□□□□ 0.35
CHMP3-203ENST00000409225 APOLD1Q96LR9 279 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 SPAG5Q96R06 1193 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 RAB20Q9NX57 234 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 SARDHQ9UL12 918 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 PCDHA7Q9UN72 937 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 SATB2Q9UPW6 733 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 DOCK9Q9BZ29 2069 aa17.22■□□□□ 0.35
CHMP3-203ENST00000409225 PIEZO2Q9H5I5 2752 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 GABBR2O75899 941 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 GIMD1P0DJR0 217 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 SETSIPP0DME0 302 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 ALPPL2P10696 532 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 RBMS1P29558 406 aaKnown RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 GTF2H1P32780 548 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 NNMTP40261 264 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 ME1P48163 572 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 CSRP3P50461 194 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 ENPEPQ07075 957 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 CNTN1Q12860 1018 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 AGBL4Q5VU57 503 aa17.21■□□□□ 0.35
CHMP3-203ENST00000409225 FOXD4L5Q5VV16 416 aaPredicted RBP17.21■□□□□ 0.35
CHMP3-203ENST00000409225 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms