RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 RTL3Q8N8U3 475 aaKnown RBP17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 WFIKKN2Q8TEU8 576 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 RETREG1Q9H6L5 497 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 ELOVL2Q9NXB9 296 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 DLGAP2Q9P1A6 1054 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 DNAI1Q9UI46 699 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 PYCARDQ9ULZ3 195 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 STARD13Q9Y3M8 1113 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 OR51B4Q9Y5P0 310 aa17.26■□□□□ 0.35
HMGA1P7-201ENST00000406908 H3BRJ5 948 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 RNF40O75150 1001 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 RHOCP08134 193 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 ERCC2P18074 760 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 AMPD1P23109 780 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 KDELR1P24390 212 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 ARL4AP40617 200 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 MARCKSL1P49006 195 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 MAPKAPK2P49137 400 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 PLK1P53350 603 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 OXCT1P55809 520 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 MMRN1Q13201 1228 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 DPYSQ14117 519 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 DPYSL3Q14195 570 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 LRRC32Q14392 662 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 PDK2Q15119 407 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 PLEKHG6Q3KR16 790 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 FUT11Q495W5 492 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 PITRM1Q5JRX3 1037 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 ZFYVE27Q5T4F4 411 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 C6orf118Q5T5N4 469 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 MBLAC2Q68D91 279 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 NUDT18Q6ZVK8 323 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 SETD3Q86TU7 594 aaPredicted RBP17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 NT5DC3Q86UY8 548 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 AHI1Q8N157 1196 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 SYNPOQ8N3V7 929 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 TMEM105Q8N8V8 129 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 KCTD6Q8NC69 237 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 USP33Q8TEY7 942 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 SORCS1Q8WY21 1168 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 KRT35Q92764 455 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 TTC17Q96AE7 1141 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 CSPG4P5Q96PW8 444 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 FEM1AQ9BSK4 669 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 NOL6Q9H6R4 1146 aaKnown RBP17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 CATSPERBQ9H7T0 1116 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 ZDHHC4Q9NPG8 344 aa17.25■□□□□ 0.35
HMGA1P7-201ENST00000406908 A0A0D9SEW6 157 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 ILVBLA1L0T0 632 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 FGF10O15520 208 aaPredicted RBP17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 DAPK3O43293 454 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 PSTPIP1O43586 416 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 TIMM44O43615 452 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 TIE1P35590 1138 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 SLC12A1Q13621 1099 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 DMC1Q14565 340 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 C2orf27AQ580R0 203 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 EGFLAMQ63HQ2 1017 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 PKN3Q6P5Z2 889 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 OR7D4Q8NG98 312 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 RNF25Q96BH1 459 aaPredicted RBP17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 CALN1Q9BXU9 219 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 CIPCQ9C0C6 399 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 KLC2Q9H0B6 622 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 ETNK2Q9NVF9 386 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 RCOR3Q9P2K3 495 aaPredicted RBP17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 MFHAS1Q9Y4C4 1052 aa17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
HMGA1P7-201ENST00000406908 NUP205Q92621 2012 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 LRRD1A4D1F6 860 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 C3orf70A6NLC5 250 aaPredicted RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 FTCDO95954 541 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 KRT1P04264 644 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 POLR2EP19388 210 aaKnown RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 CTNNA2P26232 953 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 ACVRL1P37023 503 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 CTSOP43234 321 aaPredicted RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 RPS9P46781 194 aaKnown RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 MRPS21P82921 87 aaKnown RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 GNA12Q03113 381 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 EIF4HQ15056 248 aaKnown RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 TMEM31Q5JXX7 168 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 PEX26Q7Z412 305 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 MAP7D3Q8IWC1 876 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 SYCE1Q8N0S2 351 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 CYB5D2Q8WUJ1 264 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 ACOX2Q99424 681 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 PSMB7Q99436 277 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 C1QTNF1Q9BXJ1 281 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 MUC3BQ9H195 1237 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 CHRDQ9H2X0 955 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 POLR3BQ9NW08 1133 aaPredicted RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 TRMT1Q9NXH9 659 aaKnown RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 DDX56Q9NY93 547 aaKnown RBP17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 AMFRQ9UKV5 643 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 PCDHA3Q9Y5H8 950 aa17.23■□□□□ 0.35
HMGA1P7-201ENST00000406908 PRR33A8MZF0 331 aa17.22■□□□□ 0.35
HMGA1P7-201ENST00000406908 DCLK1O15075 740 aa17.22■□□□□ 0.35
HMGA1P7-201ENST00000406908 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms