RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 NKIRAS2Q9NYR9 191 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 CD207Q9UJ71 328 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 RAB21Q9UL25 225 aa5.4□□□□□ -1.54
HMGB1P13-201ENST00000406019 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 QSOX1O00391 747 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 PLOD3O60568 738 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 PMPCBO75439 489 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 CELA2AP08217 269 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 TNNT1P13805 278 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 ALOX12P18054 663 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 FPR3P25089 353 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 PSMA4P25789 261 aaKnown RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 GKP32189 559 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 GGT5P36269 586 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 RCAN1P53805 252 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 ARF3P61204 181 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 ARF1P84077 181 aaKnown RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 E2F1Q01094 437 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 BFSP2Q13515 415 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 EIF4A2Q14240 407 aaKnown RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 CCDC96Q2M329 555 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 PCID2Q5JVF3 399 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 KIRREL2Q6UWL6 708 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 CCDC129Q6ZRS4 1044 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 SLC29A4Q7RTT9 530 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 KRT77Q7Z794 578 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 DIS3L2Q8IYB7 885 aaKnown RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 GLMPQ8WWB7 406 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 XAGE5Q8WWM1 108 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 ARRDC3Q96B67 414 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 NSUN4Q96CB9 384 aaKnown RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 TIGD1Q96MW7 591 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 PPP1R14DQ9NXH3 145 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 FLRT1Q9NZU1 646 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D29Q9UFV1 150 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 SLC12A4Q9UP95 1085 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 KDM3AQ9Y4C1 1321 aa5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 RSF1Q96T23 1441 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P13-201ENST00000406019 CYP3A7-CYP3A51PA0A087WV96 503 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3DA0A087WVF3 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3IA0A087WXS9 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3EA0A087X179 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3KA0A087X1G2 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3BA6NDS4 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3FA6NER0 549 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 SH2D7A6NKC9 451 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3LB9A6J9 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 H7C1Q1 480 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 ANP32CO43423 234 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TIPRLO75663 272 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 PDE8BO95263 885 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 NPSP0C0P6 89 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3HP0C7X1 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 LAMP2P13473 410 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 CYP3A7P24462 503 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 ADRA1DP25100 572 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 GRK5P34947 590 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 PDE1AP54750 535 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 SSBP2P81877 361 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 RNASELQ05823 741 aaKnown RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 DEUP1Q05D60 604 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBCEQ15813 527 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 NFIL3Q16649 462 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 FAM69AQ5T7M9 428 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3GQ6DHY5 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 SUMO4Q6EEV6 95 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3CQ6IPX1 549 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 MTHFD1LQ6UB35 978 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 NAPRTQ6XQN6 538 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TBC1D3Q8IZP1 549 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 ADSSL1Q8N142 457 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 ELP4Q96EB1 424 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 VPS50Q96JG6 964 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 ITPAQ9BY32 194 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 SEMA4BQ9NPR2 832 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TLR8Q9NR97 1041 aaKnown RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 PLSCR4Q9NRQ2 329 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 SLC22A11Q9NSA0 550 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 ASIC5Q9NY37 505 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 TAS2R10Q9NYW0 307 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 SH3BP4Q9P0V3 963 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 PIAS3Q9Y6X2 628 aa5.38□□□□□ -1.55
HMGB1P13-201ENST00000406019 GOLGA6L10A0A0M3HER8 536 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 TCRBV5S1A1TA0A578 114 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 GAGE10A6NGK3 116 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PSMD9O00233 223 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 TNPO2O14787 897 aaKnown RBP5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 ACADMP11310 421 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 UBL4AP11441 157 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PEPDP12955 493 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 IGFBP2P18065 325 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 RGS2P41220 211 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PAFAH1B1P43034 410 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 GPD2P43304 727 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 PCP4P48539 62 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 TAS2R50P59544 299 aa5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 HOXA4Q00056 320 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 SLC10A2Q12908 348 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P13-201ENST00000406019 KIAA1324Q6UXG2 1013 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms