RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 PLEKHG4BQ96PX9 1271 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 MRIQ9BWK5 157 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CYP4F12Q9HCS2 524 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 DCDC2Q9UHG0 476 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 SNX9Q9Y5X1 595 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ATP6AP2A0A1C7CYW4 349 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ATP6AP2O75787 350 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 HNRNPLP14866 589 aaKnown RBP eCLIP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 TSHRP16473 764 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 PLK1P53350 603 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 FSTL4Q6MZW2 842 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 NCAPG2Q86XI2 1143 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 PDCD6IPQ8WUM4 868 aaKnown RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 MCRS1Q96EZ8 462 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 RPF1Q9H9Y2 349 aaKnown RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 EBF1Q9UH73 591 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 ZDHHC2Q9UIJ5 367 aa9.78□□□□□ -0.84
SMC1B-202ENST00000404354 CPSF3Q9UKF6 684 aaKnown RBP9.78□□□□□ -0.84
SMC1B-202ENST00000404354 SLX4Q8IY92 1834 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 NEMP2A6NFY4 417 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 PDLIM1O00151 329 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 PENKP01210 267 aaPredicted RBP9.77□□□□□ -0.84
SMC1B-202ENST00000404354 C2P06681 752 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 CDH5P33151 784 aaPredicted RBP9.77□□□□□ -0.84
SMC1B-202ENST00000404354 GNL1P36915 607 aaPredicted RBP9.77□□□□□ -0.84
SMC1B-202ENST00000404354 NDST2P52849 883 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 PITX1P78337 314 aaPredicted RBP9.77□□□□□ -0.84
SMC1B-202ENST00000404354 ATF7IP2Q5U623 682 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 ZNF280DQ6N043 979 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 PPP1R2P3Q6NXS1 205 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 RSBN1LQ6PCB5 846 aaPredicted RBP9.77□□□□□ -0.84
SMC1B-202ENST00000404354 XKR5Q6UX68 686 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 TTC16Q8NEE8 873 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 HPDLQ96IR7 371 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 FAM210AQ96ND0 272 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 BTBD9Q96Q07 612 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 FERMT1Q9BQL6 677 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 TUT1Q9H6E5 874 aaKnown RBP9.77□□□□□ -0.84
SMC1B-202ENST00000404354 DTLQ9NZJ0 730 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 CCDC167Q9P0B6 97 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 RNF11Q9Y3C5 154 aa9.77□□□□□ -0.84
SMC1B-202ENST00000404354 ARHGAP10A1A4S6 786 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GPR25O00155 361 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 RNF103O00237 685 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 WNT10BO00744 389 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 TIPRLO75663 272 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GNAO1P09471 354 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GRIA4P48058 902 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 EMP3P54852 163 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 LPIN1Q14693 890 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 TMEM132BQ14DG7 1078 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GLRA4Q5JXX5 417 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 CERCAMQ5T4B2 595 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 EPGNQ6UW88 154 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF786Q8N393 782 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 NAT16Q8N8M0 369 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 FNIP1Q8TF40 1166 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 KBTBD7Q8WVZ9 684 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 HTR3CQ8WXA8 447 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 SLC45A3Q96JT2 553 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 SERPINI1Q99574 410 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 RRN3Q9NYV6 651 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GTSE1Q9NYZ3 720 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 RIMS3Q9UJD0 308 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 AURKCQ9UQB9 309 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 DMTF1Q9Y222 760 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 CEPT1Q9Y6K0 416 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 TLL2Q9Y6L7 1015 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 V9GYQ6 96 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 STRNO43815 780 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 FAM189A1O60320 539 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 IQCF3P0C7M6 154 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 TFEBP19484 476 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 ME2P23368 584 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GRK2P25098 689 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 PLOD1Q02809 727 aaPredicted RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 PTK2BQ14289 1009 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 ZNF423Q2M1K9 1284 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 NUP93Q8N1F7 819 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 FAM47BQ8NA70 645 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 ARNTL2Q8WYA1 636 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 PCYT2Q99447 389 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 RTKNQ9BST9 563 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 MRPS26Q9BYN8 205 aaKnown RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 FRMD8P1Q9BZ68 369 aaPredicted RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 PAIP1Q9H074 479 aaKnown RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 ILKAPQ9H0C8 392 aaPredicted RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 RBM38Q9H0Z9 239 aaKnown RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 SOX17Q9H6I2 414 aaPredicted RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 IARS2Q9NSE4 1012 aaKnown RBP9.77□□□□□ -0.85
SMC1B-202ENST00000404354 DNAJC28Q9NX36 388 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 GGA3Q9NZ52 723 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 CDC14AQ9UNH5 594 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 AP4E1Q9UPM8 1137 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 SORCS3Q9UPU3 1222 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 CDY2AQ9Y6F7 541 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 CDY1Q9Y6F8 540 aa9.77□□□□□ -0.85
SMC1B-202ENST00000404354 RGSL1A5PLK6 1076 aa9.76□□□□□ -0.85
SMC1B-202ENST00000404354 TRIM13O60858 407 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms