RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CNTROBQ8N137 903 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TMEM217Q8N7C4 229 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TSPYL6Q8N831 410 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 ANKRD52Q8NB46 1076 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TDRD7Q8NHU6 1098 aaKnown RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 ADAMTS18Q8TE60 1221 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 UROC1Q96N76 676 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 NPAS1Q99742 590 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 SENP7Q9BQF6 1050 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 CHCHD6Q9BRQ6 235 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 DUSP26Q9BV47 211 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 GATA5Q9BWX5 397 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TM2D2Q9BX73 214 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 RNF26Q9BY78 433 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 TRIM2Q9C040 744 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 SYNPO2LQ9H987 977 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 PCDHB16Q9NRJ7 776 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 ALKBH4Q9NXW9 302 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC17A6Q9P2U8 582 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 ORC3Q9UBD5 711 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 UPB1Q9UBR1 384 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 CD207Q9UJ71 328 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 PACSIN3Q9UKS6 424 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 SIRT4Q9Y6E7 314 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 KAT6AQ92794 2004 aa4.26□□□□□ -1.73
HMGB1P17-201ENST00000403495 CCDC196A0A1B0GTZ2 297 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 CXorf65A6NEN9 183 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 H7C1Q1 480 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 IFNL4K9M1U5 179 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 PRRG2O14669 202 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 PER2O15055 1255 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 RAMP2O60895 175 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 METTL18O95568 372 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 F9P00740 461 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 URODP06132 367 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 GPD1P21695 349 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 GSTM2P28161 218 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 MAN1A1P33908 653 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 RGS2P41220 211 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 PAFAH1B1P43034 410 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 CCR9P51686 369 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 CDH15P55291 814 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 PFKFB3Q16875 520 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC45A4Q5BKX6 768 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZNF667Q5HYK9 610 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 HYIQ5T013 277 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 PRAMEF17Q5VTA0 474 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 VSTM1Q6UX27 236 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 ENDOVQ8N8Q3 282 aaKnown RBP4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 CAGE1Q8TC20 777 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC9A6Q92581 669 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 KIF1BPQ96EK5 621 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 FUZQ9BT04 418 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 EFHD1Q9BUP0 239 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 SCAND2PQ9GZW5 306 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 INTS2Q9H0H0 1204 aaKnown RBP4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 PRDM13Q9H4Q3 707 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 SEMA4BQ9NPR2 832 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 MYRFQ9Y2G1 1151 aa4.25□□□□□ -1.73
HMGB1P17-201ENST00000403495 NCANO14594 1321 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 SPATA31A1Q5TZJ5 1347 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 SLC22A23A1A5C7 686 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 DYTNA2CJ06 578 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 LRRC3CA6NJW4 275 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 MCIDASD6RGH6 385 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 BAIAP3O94812 1187 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 CBX6O95503 412 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 ENO1P06733 434 aaKnown RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 TGM2P21980 687 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 MTNR1AP48039 350 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 SOX2P48431 317 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 CLK3P49761 638 aaKnown RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 RPS6KA3P51812 740 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 ADPRHP54922 357 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 GOLGA8FQ08AF8 430 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 TBL3Q12788 808 aaKnown RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 GPR162Q16538 588 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 BAK1Q16611 211 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZXDCQ2QGD7 858 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZNF474Q6S9Z5 364 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 C16orf71Q8IYS4 520 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 PLD5Q8N7P1 536 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 ADPRHL1Q8NDY3 354 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 RFWD2Q8NHY2 731 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 RFFLQ8WZ73 363 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 PIGKQ92643 395 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 KAT2AQ92830 837 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 SARAFQ96BY9 339 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 ZNF764Q96H86 408 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 FCRL5Q96RD9 977 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 TIMP4Q99727 224 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 HEMGNQ9BXL5 484 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 FRMD8Q9BZ67 464 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 EPHX3Q9H6B9 360 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 TMEM248Q9NWD8 314 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 GAR1Q9NY12 217 aaKnown RBP4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 SUFUQ9UMX1 484 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 WNT6Q9Y6F9 365 aa4.24□□□□□ -1.73
HMGB1P17-201ENST00000403495 POLR2AP24928 1970 aaKnown RBP4.23□□□□□ -1.73
HMGB1P17-201ENST00000403495 CYP2D7A0A087X1C5 515 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms