RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 CDK16Q00536 496 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 UBE3AQ05086 875 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 STAT4Q14765 748 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 C5orf22Q49AR2 442 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 PLPP4Q5VZY2 271 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ARHGAP36Q6ZRI8 547 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 ATPAF2Q8N5M1 289 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 FBXO36Q8NEA4 188 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 MICAL1Q8TDZ2 1067 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 TEKT5Q96M29 485 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 RPRD1AQ96P16 312 aaPredicted RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 CCDC77Q9BR77 488 aa13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 NOL6Q9H6R4 1146 aaKnown RBP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
CEACAM1-206ENST00000403136 NUP205Q92621 2012 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 KIAA1671Q9BY89 1806 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 A0A087WUV0 522 aaPredicted RBP13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 C5orf67F2Z3F1 127 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 MATN3O15232 486 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 ZBTB24O43167 697 aaPredicted RBP13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 STC2O76061 302 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 RB1P06400 928 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 MYOGP15173 224 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 PSMB4P28070 264 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 LMAN1P49257 510 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 PAPOLAP51003 745 aaKnown RBP13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 SARNPP82979 210 aaKnown RBP13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 ZBTB17Q13105 803 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 MTM1Q13496 603 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 TFAP2DQ7Z6R9 452 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 PALM2Q8IXS6 379 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 SH2D3CQ8N5H7 860 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 FAM76AQ8TAV0 307 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 PGM2Q96G03 612 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 CYP2S1Q96SQ9 504 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 LRRC3Q9BY71 257 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 ADAM21Q9UKJ8 722 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 TEX264Q9Y6I9 313 aa13.62□□□□□ -0.23
CEACAM1-206ENST00000403136 GRXCR1A8MXD5 290 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 F5H423 210 aaPredicted RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 F5H5T6 163 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 GLUD1P00367 558 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 KLKB1P03952 638 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 CCNB1P14635 433 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 TSHRP16473 764 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 GABRR2P28476 465 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 CD68P34810 354 aaPredicted RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 ELK3P41970 407 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 GPX6P59796 221 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 LONRF1Q17RB8 773 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 CCDC38Q502W7 563 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 FAM133BQ5BKY9 247 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 DENND1CQ8IV53 801 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 IGDCC3Q8IVU1 814 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 LGI2Q8N0V4 545 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 PDCD7Q8N8D1 485 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 EPS8L3Q8TE67 593 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 MYEOVQ96EZ4 313 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 AGAP3Q96P47 875 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 WDR83Q9BRX9 315 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 XAB2Q9HCS7 855 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 EIF2B3Q9NR50 452 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 ZNF212Q9UDV6 495 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 NOVA2Q9UNW9 492 aaKnown RBP13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 CLUHO75153 1309 aa13.61□□□□□ -0.23
CEACAM1-206ENST00000403136 SMIM23A6NLE4 172 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 RASA4BC9J798 803 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 RGS16O15492 202 aaPredicted RBP13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 RASA4O43374 803 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 LPXNO60711 386 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 ARHGEF15O94989 841 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 CSPG5O95196 566 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 MBL2P11226 248 aaPredicted RBP13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 HDCP19113 662 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 CORO1AP31146 461 aaKnown RBP13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 SLC6A4P31645 630 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 GRIA1P42261 906 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 MAGEA3P43357 314 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 SLCO1A2P46721 670 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 CLCN4P51793 760 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 IFI35P80217 286 aaPredicted RBP13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 SKIDA1Q1XH10 827 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 DNAJC21Q5F1R6 531 aaKnown RBP13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 C9orf50Q5SZB4 431 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 TXNDC8Q6A555 127 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 ITPRIPL1Q6GPH6 555 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 TIGD7Q6NT04 549 aaPredicted RBP13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 GAREM2Q75VX8 874 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 ZNF534Q76KX8 674 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 SPRED2Q7Z698 418 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 TMC8Q8IU68 726 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 ELMOD1Q8N336 334 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 ATP11CQ8NB49 1132 aa13.6□□□□□ -0.23
CEACAM1-206ENST00000403136 LRRC39Q96DD0 335 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms