RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 GPD1P21695 349 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 ZNF143P52747 638 aaPredicted RBP17.19■□□□□ 0.34
APTR-201ENST00000398043 OXCT1P55809 520 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 ZBED6P86452 979 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 ECT2LQ008S8 904 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 OGDHQ02218 1023 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 MAMLD1Q13495 774 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 CDO1Q16878 200 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 SPDYCQ5MJ68 293 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 PPP1R2P3Q6NXS1 205 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 DNAAF5Q86Y56 855 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 CCDC117Q8IWD4 279 aaPredicted RBP17.19■□□□□ 0.34
APTR-201ENST00000398043 IQCDQ96DY2 449 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 MAGEB5Q9BZ81 275 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 MTG2Q9H4K7 406 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 SLCO3A1Q9UIG8 710 aa17.19■□□□□ 0.34
APTR-201ENST00000398043 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
APTR-201ENST00000398043 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 CCP110O43303 1012 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 MOCS3O95396 460 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 MPLP40238 635 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
APTR-201ENST00000398043 HNRNPA1L2Q32P51 320 aaKnown RBP17.18■□□□□ 0.34
APTR-201ENST00000398043 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 KIAA1324Q6UXG2 1013 aaKnown RBP17.18■□□□□ 0.34
APTR-201ENST00000398043 PRR23CQ6ZRP0 262 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 TMEFF1Q8IYR6 380 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 CCDC185Q8N715 623 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 FAM172AQ8WUF8 416 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 NTAN1Q96AB6 310 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 MCEEQ96PE7 176 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 PSMB7Q99436 277 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 ISCUQ9H1K1 167 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 OSBPL2Q9H1P3 480 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 FBRSQ9HAH7 460 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 MPP6Q9NZW5 540 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 PPARGC1AQ9UBK2 798 aaKnown RBP17.18■□□□□ 0.34
APTR-201ENST00000398043 SUN2Q9UH99 717 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 CYP8B1Q9UNU6 501 aa17.18■□□□□ 0.34
APTR-201ENST00000398043 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.18■□□□□ 0.34
APTR-201ENST00000398043 CNOT1A5YKK6 2376 aaKnown RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 TMCO5BA8MYB1 307 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 TTC34A8MYJ7 566 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 FAM72CH0Y354 149 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 RTN2O75298 545 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 FTLP02792 175 aaPredicted RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 HNRNPH3P31942 346 aaKnown RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 PTGER3P43115 390 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 STK19P49842 368 aaPredicted RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 TPMTP51580 245 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 SULT2A1Q06520 285 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 ZNF252P-AS1Q0IIN9 211 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 SCAPQ12770 1279 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 CCDC6Q16204 474 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 C9orf64Q5T6V5 341 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 FAM72AQ5TYM5 149 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 FAM72DQ6L9T8 149 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 SLC36A4Q6YBV0 504 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 LPCAT2Q7L5N7 544 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 SETD3Q86TU7 594 aaPredicted RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 FAM72BQ86X60 149 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 SLC41A1Q8IVJ1 513 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 FRS2Q8WU20 508 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 SIPA1Q96FS4 1042 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 RPL10LQ96L21 214 aaKnown RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 CNPY3Q9BT09 278 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 RSPH9Q9H1X1 276 aaPredicted RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 WSB2Q9NYS7 404 aaPredicted RBP17.17■□□□□ 0.34
APTR-201ENST00000398043 OR12D3Q9UGF7 316 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 USP18Q9UMW8 372 aa17.17■□□□□ 0.34
APTR-201ENST00000398043 ATMINO43313 823 aaPredicted RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 SIN3BO75182 1162 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 PLEKP08567 350 aaPredicted RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 NUMBP49757 651 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 RPS14P62263 151 aaKnown RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 CREB5Q02930 508 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 LMNB2Q03252 620 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 SF3A2Q15428 464 aaKnown RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 PEAR1Q5VY43 1037 aaPredicted RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 RNF219Q5W0B1 726 aaPredicted RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 LRRC31Q6UY01 552 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 NLRP14Q86W24 1093 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 ARFGAP1Q8N6T3 406 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 CPLX3Q8WVH0 158 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 PRCCQ92733 491 aaPredicted RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 PTPRN2Q92932 1015 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 RMDN1Q96DB5 314 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 ZNF419Q96HQ0 510 aaPredicted RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 SMOC1Q9H4F8 434 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 VPS45Q9NRW7 570 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 PARVAQ9NVD7 372 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 NENFQ9UMX5 172 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 LUC7L2Q9Y383 392 aaKnown RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 BZW2Q9Y6E2 419 aaKnown RBP17.16■□□□□ 0.34
APTR-201ENST00000398043 PLXNA2O75051 1894 aa17.16■□□□□ 0.34
APTR-201ENST00000398043 A0A0D9SEW6 157 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 TARSL2A2RTX5 802 aaKnown RBP17.15■□□□□ 0.34
APTR-201ENST00000398043 TMEM191CA6NGB0 347 aa17.15■□□□□ 0.34
APTR-201ENST00000398043 MAP3K13O43283 966 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms