RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CHCHD4Q8N4Q1 142 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 USP33Q8TEY7 942 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TFAP2BQ92481 460 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 FAM149B1Q96BN6 582 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM176AQ96HP8 235 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PLEKHG4BQ96PX9 1271 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 KCNK13Q9HB14 408 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ITGB1BP2Q9UKP3 347 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 USP18Q9UMW8 372 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PCDHAC2Q9Y5I4 1007 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TAF1LQ8IZX4 1826 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SDR42E2A6NKP2 422 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM114B3SHH9 223 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 F9P00740 461 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 HSPA1AP0DMV8 641 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 HSPA1BP0DMV9 641 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 HOXB6P17509 224 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TTKP33981 857 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PNPLA4P41247 253 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PPIL2Q13356 520 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PDK1Q15118 436 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RGS21Q2M5E4 152 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PERM1Q5SV97 790 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 WDTC1Q8N5D0 677 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 FAR2Q96K12 515 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TMEM39BQ9GZU3 492 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RPAP3Q9H6T3 665 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 C6orf203Q9P0P8 240 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PACSIN3Q9UKS6 424 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 STAP1Q9ULZ2 295 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TRIM43BA6NCK2 446 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CHEK2O96017 543 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 APBA3O96018 575 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RFTN1Q14699 578 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 USP41Q3LFD5 358 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SPATS1Q496A3 300 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RNF19BQ6ZMZ0 732 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PIWIL4Q7Z3Z4 852 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RNF135Q8IUD6 432 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ZSCAN18Q8TBC5 510 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 DNAJC1Q96KC8 554 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 GBA2Q9HCG7 927 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RAB6BQ9NRW1 208 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TRNAU1APQ9NX07 287 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PSMD13Q9UNM6 376 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CCDC78A2IDD5 438 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 BCL10O95999 233 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CAPN1P07384 714 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 MAGEA12P43365 314 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 FOLH1Q04609 750 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ZNF618Q5T7W0 954 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SCARA3Q6AZY7 606 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 XYLT1Q86Y38 959 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 MICU2Q8IYU8 434 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TERB1Q8NA31 727 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CDC26Q8NHZ8 85 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ACTRT2Q8TDY3 377 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 TRPC4APQ8TEL6 797 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PWWP2AQ96N64 755 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 QKIQ96PU8 341 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 INO80BQ9C086 356 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CDT1Q9H211 546 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 ARL8BQ9NVJ2 186 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 RSL24D1Q9UHA3 163 aaKnown RBP5.57□□□□□ -1.52
PTPRD-205ENST00000397611 DOLKQ9UPQ8 538 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 PCDHB12Q9Y5F1 795 aa5.57□□□□□ -1.52
PTPRD-205ENST00000397611 SPDYE16A6NNV3 312 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 FARP2O94887 1054 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TRUB2O95900 331 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PENKP01210 267 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ACADVLP49748 655 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SCAPQ12770 1279 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PRKG1Q13976 671 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SATL1Q86VE3 508 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 DHX35Q9H5Z1 703 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 RPF1Q9H9Y2 349 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PCDH18Q9HCL0 1135 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ETNK2Q9NVF9 386 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 FNDC3AQ9Y2H6 1198 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 HBS1LQ9Y450 684 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TAF1P21675 1872 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PTPRJQ12913 1337 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 H3BNX3 289 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 M0QYV0 167 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 FAAP100Q0VG06 881 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 GALNT1Q10472 559 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 ZBTB49Q6ZSB9 765 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SLC7A14Q8TBB6 771 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 CPXM1Q96SM3 734 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 WDR83Q9BRX9 315 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 PI4K2AQ9BTU6 479 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TRIM62Q9BVG3 475 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TASP1Q9H6P5 420 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 DNAJC28Q9NX36 388 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 KLHL8Q9P2G9 620 aaPredicted RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 IPO11Q9UI26 975 aaKnown RBP5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TRHDEQ9UKU6 1024 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 TBC1D30Q9Y2I9 924 aa5.56□□□□□ -1.52
PTPRD-205ENST00000397611 SQORQ9Y6N5 450 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms