RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 DGAT2Q96PD7 388 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 PRRX2Q99811 253 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 TBCDQ9BTW9 1192 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 MLPHQ9BV36 600 aaPredicted RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 HERC2P3Q9BVR0 1158 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 CACNG6Q9BXT2 260 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 AP5S1Q9NUS5 200 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 ZSCAN32Q9NX65 697 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 PPP1R14DQ9NXH3 145 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 CWC15Q9P013 229 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SEPT10Q9P0V9 454 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 CAPN11Q9UMQ6 739 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SUFUQ9UMX1 484 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 BTBD3Q9Y2F9 522 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 ADAM18Q9Y3Q7 739 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 NFS1Q9Y697 457 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 V9GYY5 206 aaPredicted RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 X6R8D5 127 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 MYBBP1AQ9BQG0 1328 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 FYCO1Q9BQS8 1478 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 CROCC2H7BZ55 1655 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 THSD7AQ9UPZ6 1657 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 TRBC2A0A5B9 178 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 LRRIQ4A6NIV6 560 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 TMCO5BA8MYB1 307 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SYN3O14994 580 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SLITRK3O94933 977 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 STAMBPO95630 424 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 PROCP04070 461 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 AGAP20933 346 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 FGFR3P22607 806 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 ACVR2AP27037 513 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 RFC4P35249 363 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 TAGLN2P37802 199 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SLC15A1P46059 708 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 PIK3CGP48736 1102 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 PCBP4P57723 403 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 LRRC24Q50LG9 513 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 XKR9Q5GH70 373 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 RBM20Q5T481 1227 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 TNS2Q63HR2 1409 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 PLAG1Q6DJT9 500 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 FCRL6Q6DN72 434 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 INTS8Q75QN2 995 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 HOOK3Q86VS8 718 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SMYD4Q8IYR2 804 aaPredicted RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 ANKS4BQ8N8V4 417 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 METTL21AQ8WXB1 218 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 MRPL38Q96DV4 380 aaKnown RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 SPACA9Q96E40 222 aaPredicted RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 ASCC2Q9H1I8 757 aaPredicted RBP7.01□□□□□ -1.29
SMCO1-201ENST00000397537 EXOC1Q9NV70 894 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 HSPBP1Q9NZL4 362 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 KCND2Q9NZV8 630 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 MARCH2Q9P0N8 246 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 CHKBQ9Y259 395 aa7.01□□□□□ -1.29
SMCO1-201ENST00000397537 NEXMIFQ5QGS0 1516 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ARHGEF5Q12774 1597 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 LOC100996750A0A140TA64 210 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 PRSS29PA6NIE9 313 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 CD3EAPO15446 510 aaKnown RBP7□□□□□ -1.29
SMCO1-201ENST00000397537 PRAMEF12O95522 483 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ABCB1P08183 1280 aaPredicted RBP7□□□□□ -1.29
SMCO1-201ENST00000397537 HSD17B2P37059 387 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 SLC11A2P49281 568 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 PRKCEQ02156 737 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 TUBB3Q13509 450 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ALCAMQ13740 583 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 DBN1Q16643 649 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 PRRT3Q5FWE3 981 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 SPDYAQ5MJ70 313 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 KCNV1Q6PIU1 500 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 SYNE3Q6ZMZ3 975 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 CACNA2D4Q7Z3S7 1137 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 TRIM74Q86UV6 250 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 TRIM73Q86UV7 250 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ZNF655Q8N720 491 aaPredicted RBP7□□□□□ -1.29
SMCO1-201ENST00000397537 BANPQ8N9N5 519 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 DAGLBQ8NCG7 672 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 OR52K1Q8NGK4 314 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ALG14Q96F25 216 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 TACO1Q9BSH4 297 aaKnown RBP7□□□□□ -1.29
SMCO1-201ENST00000397537 HEMGNQ9BXL5 484 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ZNF341Q9BYN7 854 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 B3GNT4Q9C0J1 378 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 EHD1Q9H4M9 534 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 SPATS2LQ9NUQ6 558 aaKnown RBP7□□□□□ -1.29
SMCO1-201ENST00000397537 INTS13Q9NVM9 706 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 BEX4Q9NWD9 120 aaPredicted RBP7□□□□□ -1.29
SMCO1-201ENST00000397537 TMOD2Q9NZR1 351 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 FBXO40Q9UH90 709 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ACSL6Q9UKU0 697 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 WASF3Q9UPY6 502 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 TNFSF13BQ9Y275 285 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 GDAQ9Y2T3 454 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 ASB1Q9Y576 335 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 SNX9Q9Y5X1 595 aa7□□□□□ -1.29
SMCO1-201ENST00000397537 PRAMEF22A3QJZ6 481 aa6.99□□□□□ -1.29
SMCO1-201ENST00000397537 OR2A25A4D2G3 310 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms