RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 THAP10Q9P2Z0 257 aaPredicted RBP10.9□□□□□ -0.66
NUP98-205ENST00000397007 MIF4GDA9UHW6 222 aaKnown RBP10.89□□□□□ -0.67
NUP98-205ENST00000397007 BUB1O43683 1085 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 KCNT1Q5JUK3 1230 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 TP53INP2Q8IXH6 220 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 LGI2Q8N0V4 545 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 TXLNBQ8N3L3 684 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 RTP4Q96DX8 246 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 LUC7LQ9NQ29 371 aaKnown RBP10.89□□□□□ -0.67
NUP98-205ENST00000397007 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.89□□□□□ -0.67
NUP98-205ENST00000397007 ZKSCAN5Q9Y2L8 839 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 PIAS3Q9Y6X2 628 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 A0A1W2PQF6 199 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 KANSL1LA0AUZ9 987 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 ATP9BO43861 1147 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 MAFKO60675 156 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 EGFP01133 1207 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 IGLV3-19P01714 112 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 HMBSP08397 361 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 PYGMP11217 842 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 SERINC3Q13530 473 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 EIF4HQ15056 248 aaKnown RBP10.89□□□□□ -0.67
NUP98-205ENST00000397007 HSF5Q4G112 596 aaPredicted RBP10.89□□□□□ -0.67
NUP98-205ENST00000397007 ZNF557Q8N988 423 aaPredicted RBP10.89□□□□□ -0.67
NUP98-205ENST00000397007 VANGL2Q9ULK5 521 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 F5H5T6 163 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 KDELR3O43731 214 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 KRT86O43790 486 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 CR2P20023 1033 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 DRD1P21728 446 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 GRIA2P42262 883 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 IFNAR2P48551 515 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 MESDQ14696 234 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 CYP1B1Q16678 543 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 ARL13BQ3SXY8 428 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 MFSD7Q6UXD7 560 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 SPOCD1Q6ZMY3 1216 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 BBS12Q6ZW61 710 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 CIR1Q86X95 450 aaPredicted RBP10.89□□□□□ -0.67
NUP98-205ENST00000397007 APCDD1Q8J025 514 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 DCAF4L2Q8NA75 395 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 USP33Q8TEY7 942 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 CARD9Q9H257 536 aa10.89□□□□□ -0.67
NUP98-205ENST00000397007 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 MAGEA9P43362 315 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 PLEKHG6Q3KR16 790 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 EFHC2Q5JST6 749 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
NUP98-205ENST00000397007 SYCE1Q8N0S2 351 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 AHI1Q8N157 1196 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 WFIKKN2Q8TEU8 576 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 MPP6Q9NZW5 540 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 GGA2Q9UJY4 613 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 WASH3PC4AMC7 463 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 K7ESF4 209 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 MAN2B1O00754 1011 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 PRPSAP2O60256 369 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 TBL1XO60907 577 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 RNF8O76064 485 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 SRPRAP08240 638 aaKnown RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 ERCC2P18074 760 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 AOC1P19801 751 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 SP100P23497 879 aaPredicted RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 MZF1P28698 734 aaPredicted RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 GGCXP38435 758 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 YBEYP58557 167 aaPredicted RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 SMTNL2Q2TAL5 461 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 PITRM1Q5JRX3 1037 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 RABGAP1LQ5R372 815 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 DRICH1Q6PGQ1 229 aaPredicted RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 RCOR2Q8IZ40 523 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 CFAP52Q8N1V2 620 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 C12orf50Q8NA57 414 aaPredicted RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 TRIM58Q8NG06 486 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 HDAC11Q96DB2 347 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 PNKPQ96T60 521 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 MAGEH1Q9H213 219 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 BRD9Q9H8M2 597 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 ABCB8Q9NUT2 735 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 DTLQ9NZJ0 730 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 HYOU1Q9Y4L1 999 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 A0A0D9SEW6 157 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 NPC1O15118 1278 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 CLCN5P51795 746 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 COPAP53621 1224 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 PARP15Q460N3 678 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 RASSF3Q86WH2 238 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 ISG20Q96AZ6 181 aaKnown RBP10.88□□□□□ -0.67
NUP98-205ENST00000397007 WDR24Q96S15 920 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 P2RY13Q9BPV8 354 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 SLITRK6Q9H5Y7 841 aa10.88□□□□□ -0.67
NUP98-205ENST00000397007 TSPAN11A1L157 253 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 NEDD8-MDP1E9PL57 170 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 PRAMEF11O60813 436 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 NUBP1P53384 320 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 PKN3Q6P5Z2 889 aa10.87□□□□□ -0.67
NUP98-205ENST00000397007 SLC35B2Q8TB61 432 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms