RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 MT-CYBP00156 380 aaPredicted RBP15.42■□□□□ 0.06
GPC3-202ENST00000394299 MX2P20592 715 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 PLEKHG4Q58EX7 1191 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 KCTD11Q693B1 232 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 RGS9BPQ6ZS82 235 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 AZIN2Q96A70 460 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 TEKT5Q96M29 485 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 ZNF395Q9H8N7 513 aaPredicted RBP15.42■□□□□ 0.06
GPC3-202ENST00000394299 KLHL14Q9P2G3 628 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 STARD13Q9Y3M8 1113 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 ARHGEF37A1IGU5 675 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 TMEM189-UBE2V1I3L0A0 370 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 NCAM2O15394 837 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 HMBSP08397 361 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 GSTA2P09210 222 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 DHRS4L1P0CG22 281 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 PGAM1P18669 254 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 SERPINB6P35237 376 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 ABCG1P45844 678 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 EFEMP1Q12805 493 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 RTP2Q5QGT7 225 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 PIK3R6Q5UE93 754 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 CES4AQ5XG92 561 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 RNF19BQ6ZMZ0 732 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 KDELC2Q7Z4H8 507 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 NDUFAF2Q8N183 169 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 ARMC2Q8NEN0 867 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 MFSD3Q96ES6 412 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 ATXN7L3BQ96GX2 97 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 ZNF778Q96MU6 729 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 GBA3Q9H227 469 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 NPHS2Q9NP85 383 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 CHRAC1Q9NRG0 131 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 PHF24Q9UPV7 400 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 TRIM17Q9Y577 477 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 PCDHB5Q9Y5E4 795 aa15.42■□□□□ 0.06
GPC3-202ENST00000394299 VWA8A3KMH1 1905 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 KCNU1A8MYU2 1149 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 GOLGA8TH3BQL2 631 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 KRT38O76015 456 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 VNN2O95498 520 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 ALDH2P05091 517 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 NIPAL4Q0D2K0 466 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 RASIP1Q5U651 963 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 C16orf46Q6P387 395 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 MIB1Q86YT6 1006 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 RFWD2Q8NHY2 731 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 BCL7CQ8WUZ0 217 aaPredicted RBP15.41■□□□□ 0.06
GPC3-202ENST00000394299 HAPLN3Q96S86 360 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 AGAP2Q99490 1192 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 CFHR5Q9BXR6 569 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 FTHL17Q9BXU8 183 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.41■□□□□ 0.06
GPC3-202ENST00000394299 DCTN4Q9UJW0 460 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 VANGL2Q9ULK5 521 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 TRIM33Q9UPN9 1127 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.41■□□□□ 0.06
GPC3-202ENST00000394299 E9PAM4 449 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 NEFHP12036 1026 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 CPB1P15086 417 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 PAX3P23760 479 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 MRPL58Q14197 206 aaKnown RBP15.41■□□□□ 0.06
GPC3-202ENST00000394299 LGSNQ5TDP6 509 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 MANEALQ5VSG8 457 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 PRSS55Q6UWB4 352 aaPredicted RBP15.41■□□□□ 0.06
GPC3-202ENST00000394299 PACS1Q6VY07 963 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 TFAP2DQ7Z6R9 452 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 MON1AQ86VX9 555 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 SLAIN1Q8ND83 568 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 ZNF669Q96BR6 464 aaPredicted RBP15.41■□□□□ 0.06
GPC3-202ENST00000394299 SEPT5Q99719 369 aaPredicted RBP15.41■□□□□ 0.06
GPC3-202ENST00000394299 VPS11Q9H270 941 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 SLC12A4Q9UP95 1085 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 SCML2Q9UQR0 700 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 PLLPQ9Y342 182 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 NUMBLQ9Y6R0 609 aa15.41■□□□□ 0.06
GPC3-202ENST00000394299 MAFKO60675 156 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 UPP2O95045 317 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 CCNB1P14635 433 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 SERPINB4P48594 390 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 NFE2Q16621 373 aaPredicted RBP15.4■□□□□ 0.06
GPC3-202ENST00000394299 MGAT5BQ3V5L5 792 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 PPM1JQ5JR12 505 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 BRMS1LQ5PSV4 323 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 BEND5Q7L4P6 421 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 GIPC2Q8TF65 315 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 ATP2A3Q93084 1043 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 DEFB118Q96PH6 123 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 IQCGQ9H095 443 aaKnown RBP15.4■□□□□ 0.06
GPC3-202ENST00000394299 ACTR5Q9H9F9 607 aaPredicted RBP15.4■□□□□ 0.06
GPC3-202ENST00000394299 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 LRFN2Q9ULH4 789 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 TBKBP1A7MCY6 615 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 ADAM12O43184 909 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 FKTNO75072 461 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 CNTN5O94779 1100 aa15.4■□□□□ 0.06
GPC3-202ENST00000394299 ALDOAP04075 364 aaKnown RBP15.4■□□□□ 0.06
GPC3-202ENST00000394299 ALADP13716 330 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms