RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 ECT2LQ008S8 904 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 C19orf57Q0VDD7 668 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 BNIP3Q12983 259 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 ILKQ13418 452 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 ELAVL3Q14576 367 aaKnown RBP15.89■□□□□ 0.13
CHMP3-202ENST00000393773 COBLL1Q53SF7 1204 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 APCDD1Q8J025 514 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 OXR1Q8N573 874 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 OR14C36Q8NHC7 312 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 RFFLQ8WZ73 363 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 KAT5Q92993 513 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 RPL10LQ96L21 214 aaKnown RBP15.89■□□□□ 0.13
CHMP3-202ENST00000393773 HSFY1Q96LI6 401 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 FCRL3Q96P31 734 aaPredicted RBP15.89■□□□□ 0.13
CHMP3-202ENST00000393773 ARHGAP20Q9P2F6 1191 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 RAI2Q9Y5P3 530 aa15.89■□□□□ 0.13
CHMP3-202ENST00000393773 BRINP1O60477 761 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 ZNF202O95125 648 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 MOCS2O96007 188 aaPredicted RBP15.88■□□□□ 0.13
CHMP3-202ENST00000393773 RPL34P49207 117 aaKnown RBP15.88■□□□□ 0.13
CHMP3-202ENST00000393773 FMO5P49326 533 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 STILQ15468 1287 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 CNGA2Q16280 664 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 PROX2Q3B8N5 592 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 LRRC69Q6ZNQ3 347 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 MFSD2AQ8NA29 543 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 MIS12Q9H081 205 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 CYTH4Q9UIA0 394 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 NAALADL1Q9UQQ1 740 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 PCDHB4Q9Y5E5 795 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 AK5Q9Y6K8 562 aa15.88■□□□□ 0.13
CHMP3-202ENST00000393773 COL6A6A6NMZ7 2263 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 TRIM49BA6NDI0 452 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 PLRG1O43660 514 aaKnown RBP15.87■□□□□ 0.13
CHMP3-202ENST00000393773 RTN2O75298 545 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 MOCS3O95396 460 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 IL1BP01584 269 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 IGLV3-25P01717 112 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 CKMT2P17540 419 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 TACR2P21452 398 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 FKBP3Q00688 224 aaKnown RBP15.87■□□□□ 0.13
CHMP3-202ENST00000393773 INSM1Q01101 510 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-202ENST00000393773 PNOCQ13519 176 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 SLC45A4Q5BKX6 768 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 RNF219Q5W0B1 726 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-202ENST00000393773 RAP1GAP2Q684P5 730 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 ANKRD40Q6AI12 368 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 IQCHQ86VS3 1027 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 ERICH1Q86X53 443 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 CCDC117Q8IWD4 279 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-202ENST00000393773 LGI2Q8N0V4 545 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 CACTIN-AS1Q8N1I8 211 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 DCBLD1Q8N8Z6 715 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 FRS2Q8WU20 508 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 BAP1Q92560 729 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 SPAG5Q96R06 1193 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 ARMCX3Q9UH62 379 aaPredicted RBP15.87■□□□□ 0.13
CHMP3-202ENST00000393773 CEP83Q9Y592 693 aa15.87■□□□□ 0.13
CHMP3-202ENST00000393773 DOCK4Q8N1I0 1966 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 PMM2O15305 246 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 RRP8O43159 456 aaKnown RBP15.86■□□□□ 0.13
CHMP3-202ENST00000393773 SLC7A4O43246 635 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 ACP1P24666 158 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 NUMBP49757 651 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 TLE3Q04726 772 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 ZNF658Q5TYW1 1059 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-202ENST00000393773 AGBL4Q5VU57 503 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 SYPL2Q5VXT5 272 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 PCSK4Q6UW60 755 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 BEND5Q7L4P6 421 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 TRIM69Q86WT6 500 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 CHSY1Q86X52 802 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 CIR1Q86X95 450 aaPredicted RBP15.86■□□□□ 0.13
CHMP3-202ENST00000393773 LSM14AQ8ND56 463 aaKnown RBP15.86■□□□□ 0.13
CHMP3-202ENST00000393773 LMO3Q8TAP4 145 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 FAM149B1Q96BN6 582 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 NT5C1BQ96P26 610 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 TSG101Q99816 390 aa15.86■□□□□ 0.13
CHMP3-202ENST00000393773 MYO18BQ8IUG5 2567 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 MAST4O15021 2626 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3DA0A087WVF3 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3IA0A087WXS9 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3EA0A087X179 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3KA0A087X1G2 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3FA6NER0 549 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3LB9A6J9 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 SART1O43290 800 aaKnown RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 SDC3O75056 442 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 APOEP02649 317 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D3HP0C7X1 549 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 PLA2G2AP14555 144 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 PDGFRAP16234 1089 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 GLDCP23378 1020 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 MAT2AP31153 395 aaKnown RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 GPD2P43304 727 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 PITX1P78337 314 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 LRRC63Q05C16 580 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 EIF4EBP2Q13542 120 aaPredicted RBP15.85■□□□□ 0.13
CHMP3-202ENST00000393773 SLC12A1Q13621 1099 aa15.85■□□□□ 0.13
CHMP3-202ENST00000393773 TBC1D25Q3MII6 688 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms