RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 ROR1Q01973 937 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 PPP6R3Q5H9R7 873 aaPredicted RBP20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 CCDC185Q8N715 623 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 DNAJC9Q8WXX5 260 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 SNRNP25Q9BV90 132 aaKnown RBP20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 CWH43Q9H720 699 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 CNGB3Q9NQW8 809 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 ZNF180Q9UJW8 692 aa20.4■□□□□ 0.86
CSNK1D-203ENST00000392334 CFAP69A5D8W1 941 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 M0QYT0 321 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 C1QAP02745 245 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 FGFR3P22607 806 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 SERPINB3P29508 390 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 CDC25CP30307 473 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 VHLP40337 213 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 KRT81Q14533 505 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 SLC25A52Q3SY17 297 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 KBTBD12Q3ZCT8 623 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 KHDC1Q4VXA5 237 aaKnown RBP20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 RFWD3Q6PCD5 774 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 DCP1BQ8IZD4 617 aaKnown RBP20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 CENPIQ92674 756 aaPredicted RBP20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 SLC27A5Q9Y2P5 690 aa20.39■□□□□ 0.86
CSNK1D-203ENST00000392334 TNRC18O15417 2968 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 VWA8A3KMH1 1905 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 DAB1O75553 588 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 PIAS1O75925 651 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 CPB1P15086 417 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 SERPINB4P48594 390 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 SLC5A3P53794 718 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 CDK18Q07002 472 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 LBRQ14739 615 aaKnown RBP20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 TTC39BQ5VTQ0 682 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 OTUD1Q5VV17 481 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 ZNF280DQ6N043 979 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 SLC26A11Q86WA9 606 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 TRIM42Q8IWZ5 723 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 SLC7A14Q8TBB6 771 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 FAM111AQ96PZ2 611 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 YME1L1Q96TA2 773 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 LBHD1Q9BQE6 289 aaPredicted RBP20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 TMEM175Q9BSA9 504 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 FAM167BQ9BTA0 163 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 MKS1Q9NXB0 559 aa20.39■□□□□ 0.85
CSNK1D-203ENST00000392334 H0Y3Z8 333 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 GYG2O15488 501 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 FBXO21O94952 628 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 RPL17P18621 184 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 NOS2P35228 1153 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 PGFP49763 221 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 IRX1P78414 480 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 MRPL58Q14197 206 aaKnown RBP20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 BTG3Q14201 252 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 BOLA3Q53S33 107 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 PSRC1Q6PGN9 363 aaPredicted RBP20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 ARCQ7LC44 396 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 BHLHA9Q7RTU4 235 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 RTP4Q96DX8 246 aa20.38■□□□□ 0.85
CSNK1D-203ENST00000392334 SKAP2O75563 359 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 GJB5O95377 273 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 LTFP02788 710 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 PYGBP11216 843 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 BGNP21810 368 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 OCRLQ01968 901 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 ZBTB16Q05516 673 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TFDP2Q14188 446 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 FAM182AQ5T1J6 154 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TNS4Q8IZW8 715 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 PYROXD2Q8N2H3 581 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 OXNAD1Q96HP4 312 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 C7orf26Q96N11 449 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 SLC2A13Q96QE2 648 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TTPALQ9BTX7 342 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 DHX35Q9H5Z1 703 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 PAK5Q9P286 719 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 NVLO15381 856 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 LINGO3P0C6S8 592 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 CCNFP41002 786 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 MAGEA6P43360 314 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TRIM68Q6AZZ1 485 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 DARS2Q6PI48 645 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 NPNTQ6UXI9 565 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 RNF19BQ6ZMZ0 732 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TTC17Q96AE7 1141 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 VN1R3Q9BXE9 311 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 ALG13Q9NP73 1137 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 PIGVQ9NUD9 493 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 KCNK4Q9NYG8 393 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TAS2R1Q9NYW7 299 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TTLL3Q9Y4R7 772 aa20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 MRPL42Q9Y6G3 142 aaKnown RBP20.37■□□□□ 0.85
CSNK1D-203ENST00000392334 TRDMT1O14717 391 aaKnown RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 GSTA2P09210 222 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 CHRM1P11229 460 aaPredicted RBP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 IL4RP24394 825 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 YWHAGP61981 247 aaKnown RBP eCLIP20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 ACSBG2Q5FVE4 666 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 BSPRYQ5W0U4 402 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 RINLQ6ZS11 566 aa20.36■□□□□ 0.85
CSNK1D-203ENST00000392334 ARHGAP24Q8N264 748 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms