RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 FAM160B1Q5W0V3 765 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 TBCBQ99426 244 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 SIKE1Q9BRV8 207 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 PCDHAC1Q9H158 963 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 TCF7L2Q9NQB0 619 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 GNEQ9Y223 722 aaKnown RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 FOXD2O60548 495 aaPredicted RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 GCATO75600 419 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 SLC6A3Q01959 620 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 MXD4Q14582 209 aaPredicted RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 LSM12Q3MHD2 195 aaKnown RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 CERCAMQ5T4B2 595 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 PCDH20Q8N6Y1 951 aaKnown RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 GATA5Q9BWX5 397 aaPredicted RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 PDGFCQ9NRA1 345 aa18.42■□□□□ 0.54
ERCC2-201ENST00000391941 BARX2Q9UMQ3 279 aaPredicted RBP18.42■□□□□ 0.54
ERCC2-201ENST00000391941 A0A096LPK6 155 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 XPO1O14980 1071 aaKnown RBP18.41■□□□□ 0.54
ERCC2-201ENST00000391941 TPSB2P20231 275 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 GALK1P51570 392 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 TPSAB1Q15661 275 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 FAM149B1Q96BN6 582 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 LRGUKQ96M69 825 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 NT5C1AQ9BXI3 368 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 MRPL1Q9BYD6 325 aaKnown RBP18.41■□□□□ 0.54
ERCC2-201ENST00000391941 CDH19Q9H159 772 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 GGA3Q9NZ52 723 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 ZNF638Q14966 1978 aaKnown RBP18.41■□□□□ 0.54
ERCC2-201ENST00000391941 G3V2L1 256 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 TNFAIP1Q13829 316 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 OGFRL1Q5TC84 451 aaPredicted RBP18.41■□□□□ 0.54
ERCC2-201ENST00000391941 EPGNQ6UW88 154 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 MICALL2Q8IY33 904 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 CPNE9Q8IYJ1 553 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 OR6B3Q8NGW1 331 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 C18orf25Q96B23 403 aaPredicted RBP18.41■□□□□ 0.54
ERCC2-201ENST00000391941 STN1Q9H668 368 aaKnown RBP18.41■□□□□ 0.54
ERCC2-201ENST00000391941 DNAJC28Q9NX36 388 aa18.41■□□□□ 0.54
ERCC2-201ENST00000391941 P4HA1P13674 534 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 SEMA5AQ13591 1074 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 LCLAT1Q6UWP7 414 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 CATSPERGQ6ZRH7 1159 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 PID1Q7Z2X4 250 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ZBTB46Q86UZ6 589 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 JADE3Q92613 823 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 CDKL2Q92772 493 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 KIF12Q96FN5 646 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ZNF670Q9BS34 389 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 FZD8Q9H461 694 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 DPP3Q9NY33 737 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 DCDC2Q9UHG0 476 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 SLC39A10Q9ULF5 831 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 LAMA3Q16787 3333 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 SCN1AP35498 2009 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 LMO2P25791 158 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 CNTFP26441 200 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
ERCC2-201ENST00000391941 NAGLUP54802 743 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 NME3Q13232 169 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 TMEM132DQ14C87 1099 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ZNF280DQ6N043 979 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ZNF567Q8N184 647 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 CERS2Q96G23 380 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 QKIQ96PU8 341 aaKnown RBP eCLIP18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ATXN10Q9UBB4 475 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ZDHHC2Q9UIJ5 367 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 PARP14Q460N5 1801 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 RLFQ13129 1914 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ARF4P18085 180 aaPredicted RBP18.4■□□□□ 0.54
ERCC2-201ENST00000391941 RALGDSQ12967 914 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 STXBP5Q5T5C0 1151 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 LAYNQ6UX15 382 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 DNAAF3Q8N9W5 541 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 ATP6V1E2Q96A05 226 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 SPATA33Q96N06 139 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 PRDM12Q9H4Q4 367 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 CHRAC1Q9NRG0 131 aa18.4■□□□□ 0.54
ERCC2-201ENST00000391941 A0A0A0MRY4 1105 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 TMX2-CTNND1H3BSU7 103 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 ALDH1A2O94788 518 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 IL18RAPO95256 599 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 SOX11P35716 441 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 BAG6P46379 1132 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 HARS2P49590 506 aaKnown RBP18.39■□□□□ 0.53
ERCC2-201ENST00000391941 CDH15P55291 814 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 ACMSDQ8TDX5 336 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 SPATA13Q96N96 652 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 GPR20Q99678 358 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 C2orf40Q9H1Z8 148 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 PPP1R1BQ9UD71 204 aaPredicted RBP18.39■□□□□ 0.53
ERCC2-201ENST00000391941 TUBGCP4Q9UGJ1 667 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 AKT3Q9Y243 479 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 SNX10Q9Y5X0 201 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 RNASEH2AO75792 299 aaKnown RBP18.39■□□□□ 0.53
ERCC2-201ENST00000391941 C2P06681 752 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 MYBPC3Q14896 1274 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 ARL13AQ5H913 290 aaPredicted RBP18.39■□□□□ 0.53
ERCC2-201ENST00000391941 PITRM1Q5JRX3 1037 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 CYP2R1Q6VVX0 501 aa18.39■□□□□ 0.53
ERCC2-201ENST00000391941 LENG1Q96BZ8 264 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms