RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 DHPSP49366 369 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 COPAP53621 1224 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ATXN1P54253 815 aaKnown RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 SCAPQ12770 1279 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 C15orf59Q2T9L4 293 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PLA2G2CQ5R387 149 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PPP1R15BQ5SWA1 713 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PRR23CQ6ZRP0 262 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF571Q7Z3V5 609 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 C14orf80Q86SX3 495 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 CIR1Q86X95 450 aaPredicted RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 MYO19Q96H55 970 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 MRGPRX3Q96LB0 322 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 DCBLD2Q96PD2 775 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 MCEEQ96PE7 176 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ZYG11BQ9C0D3 744 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 XPO4Q9C0E2 1151 aaKnown RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 OSBPL2Q9H1P3 480 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PARD6AQ9NPB6 346 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ANLNQ9NQW6 1124 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 ITM2CQ9NQX7 267 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
GGPS1-203ENST00000391855 SLC25A13Q9UJS0 675 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 CYP8B1Q9UNU6 501 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 INVSQ9Y283 1065 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 SCINQ9Y6U3 715 aa13.04□□□□□ -0.32
GGPS1-203ENST00000391855 PTPRZ1P23471 2315 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 DDX3XO00571 662 aaKnown RBP eCLIP13.03□□□□□ -0.327e-7■■■■□ 20.7
GGPS1-203ENST00000391855 RTN2O75298 545 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 GJB6O95452 261 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 CD6P30203 668 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 HDAC4P56524 1084 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 KRT83P78385 493 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 CREB5Q02930 508 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 TTC31Q49AM3 519 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 LYSMD4Q5XG99 296 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 ZNF776Q68DI1 518 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 PLEKHA7Q6IQ23 1121 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 RABEPKQ7Z6M1 372 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 APCDD1Q8J025 514 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 FNIP1Q8TF40 1166 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 FOXJ1Q92949 421 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 NCAPGQ9BPX3 1015 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 FEM1AQ9BSK4 669 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 C2orf49Q9BVC5 232 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 PCED1AQ9H1Q7 454 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 PRSS16Q9NQE7 514 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 MBD1Q9UIS9 605 aaPredicted RBP13.03□□□□□ -0.32
GGPS1-203ENST00000391855 VPS28Q9UK41 221 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 GVINP1Q7Z2Y8 2422 aa13.03□□□□□ -0.32
GGPS1-203ENST00000391855 TMCO5BA8MYB1 307 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 CCP110O43303 1012 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 RNASEH1O60930 286 aaKnown RBP13.02□□□□□ -0.33
GGPS1-203ENST00000391855 NDUFS2O75306 463 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 DNTTP04053 509 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 GYPCP04921 128 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 TPM1P09493 284 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 MZF1P28698 734 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-203ENST00000391855 ETFBP38117 255 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 IRAK1P51617 712 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 ALFQ53S48 1182 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 EFHC2Q5JST6 749 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 MANEALQ5VSG8 457 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 HGSNATQ68CP4 663 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 DCAF4L2Q8NA75 395 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 NETO1Q8TDF5 533 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 ZNF653Q96CK0 615 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 ALG14Q96F25 216 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 MUC3BQ9H195 1237 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 ISCUQ9H1K1 167 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 SLC6A17Q9H1V8 727 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 RSPH9Q9H1X1 276 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-203ENST00000391855 MRPL47Q9HD33 250 aaKnown RBP13.02□□□□□ -0.33
GGPS1-203ENST00000391855 WSB2Q9NYS7 404 aaPredicted RBP13.02□□□□□ -0.33
GGPS1-203ENST00000391855 TAS2R14Q9NYV8 317 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 CNOT8Q9UFF9 292 aaKnown RBP13.02□□□□□ -0.33
GGPS1-203ENST00000391855 OR12D3Q9UGF7 316 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 OR51B4Q9Y5P0 310 aa13.02□□□□□ -0.33
GGPS1-203ENST00000391855 THADAQ6YHU6 1953 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 EP300Q09472 2414 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 CXorf51AA0A1B0GTR3 108 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 ILVBLA1L0T0 632 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 EIF3CLB5ME19 914 aaKnown RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 CNTN5O94779 1100 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 FTLP02792 175 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 SKILP12757 684 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 RHOQP17081 205 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 OR1E1P30953 314 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 HTR7P34969 479 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 CTSOP43234 321 aaPredicted RBP13.01□□□□□ -0.33
GGPS1-203ENST00000391855 MAPKAPK2P49137 400 aa13.01□□□□□ -0.33
GGPS1-203ENST00000391855 TPMTP51580 245 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms