RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CREB5Q02930 508 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 CREMQ03060 361 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF33BQ06732 778 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TNFRSF9Q07011 255 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PPARAQ07869 468 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC20A2Q08357 652 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 NSUN2Q08J23 767 aaKnown RBP eCLIP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 GALNT2Q10471 571 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ITGADQ13349 1161 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 KLF1Q13351 362 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TDGQ13569 410 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TRA2AQ13595 282 aaKnown RBP eCLIP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TNFAIP1Q13829 316 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 RAB39AQ14964 217 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 KPNB1Q14974 876 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 NCAPHQ15003 741 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF174Q15697 407 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PNLIPRP3Q17RR3 467 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SV2CQ496J9 727 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 EIPR1Q53HC9 387 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 FASTKD1Q53R41 847 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZC3H12BQ5HYM0 836 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ADAMTSL4-AS1Q5T5F5 129 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF691Q5VV52 312 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 RNLSQ5VYX0 342 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 Q5W150 140 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 FBXW10Q5XX13 1052 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 STYK1Q6J9G0 422 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 FAM53AQ6NSI3 398 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 HMBOX1Q6NT76 420 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ESRP1Q6NXG1 681 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC27A1Q6PCB7 646 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 VHLLQ6RSH7 139 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 KCNT2Q6UVM3 1135 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 LRIG3Q6UXM1 1119 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 LRRC31Q6UY01 552 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ATF7IPQ6VMQ6 1270 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 RUFY4Q6ZNE9 571 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 Q6ZSV7 163 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF365Q70YC5 407 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 DSG4Q86SJ6 1040 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 DPP9Q86TI2 863 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 MTDHQ86UE4 582 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 CAMK1DQ8IU85 385 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PHYKPLQ8IUZ5 450 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 RASGRP3Q8IV61 690 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 UEVLDQ8IX04 471 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZC3H3Q8IXZ2 948 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 MAML2Q8IZL2 1156 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 LSMEM2Q8N112 164 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 RNF175Q8N4F7 328 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 STPG4Q8N801 248 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF114Q8NC26 417 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SLC24A4Q8NFF2 622 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 OR6P1Q8NGX9 317 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 RFWD2Q8NHY2 731 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 LNX1Q8TBB1 728 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 POC1BQ8TC44 478 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ATG4AQ8WYN0 398 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 FIG4Q92562 907 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 KAT2BQ92831 832 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SMARCD2Q92925 531 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 MKL1Q969V6 931 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ESAMQ96AP7 390 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 MTBPQ96DY7 904 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ALG14Q96F25 216 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 BCANQ96GW7 911 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 REXO5Q96IC2 774 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 GMPPAQ96IJ6 420 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TXNDC15Q96J42 360 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 OR1F2PQ96R84 312 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 GAL3ST4Q96RP7 486 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PSMB7Q99436 277 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 GFI1Q99684 422 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SYT15Q9BQS2 421 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TINF2Q9BSI4 451 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 LRRC1Q9BTT6 524 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 MYL10Q9BUA6 226 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 DPCDQ9BVM2 203 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 C1orf43Q9BWL3 253 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 BOCQ9BWV1 1114 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SORBS1Q9BX66 1292 aaKnown RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PACSIN1Q9BY11 444 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 IMPG2Q9BZV3 1241 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ING2Q9H160 280 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TMX4Q9H1E5 349 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SMOC2Q9H3U7 446 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PCIF1Q9H4Z3 704 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PIF1Q9H611 641 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 PLEKHA3Q9HB20 300 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZNF71Q9NQZ8 489 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 STAU2Q9NUL3 570 aaKnown RBP eCLIP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 TMEM140Q9NV12 185 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ATAD3AQ9NVI7 634 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 HCFC1R1Q9NWW0 138 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 SMARCAL1Q9NZC9 954 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 UBP1Q9NZI7 540 aa-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 VSX1Q9NZR4 365 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ZKSCAN7Q9P0L1 754 aaPredicted RBP-0.27□□□□□ -2.45
TRAJ28-201ENST00000390509 ABCD2Q9UBJ2 740 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms