RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 UBL4BQ8N7F7 174 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 RTL3Q8N8U3 475 aaKnown RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 TERB1Q8NA31 727 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 EXD1Q8NHP7 514 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 FAF2Q96CS3 445 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 SHDQ96IW2 340 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 ZNF670Q9BS34 389 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 GGA2Q9UJY4 613 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 MTF2Q9Y483 593 aaPredicted RBP13.01□□□□□ -0.33
SMN1-202ENST00000380707 KIAA1549LQ6ZVL6 1849 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 MIA3Q5JRA6 1907 aa13.01□□□□□ -0.33
SMN1-202ENST00000380707 A0A0D9SEW6 157 aa13□□□□□ -0.33
SMN1-202ENST00000380707 KANSL1LA0AUZ9 987 aa13□□□□□ -0.33
SMN1-202ENST00000380707 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
SMN1-202ENST00000380707 K7EQS6 105 aa13□□□□□ -0.33
SMN1-202ENST00000380707 DCLK1O15075 740 aa13□□□□□ -0.33
SMN1-202ENST00000380707 KIF5CO60282 957 aa13□□□□□ -0.33
SMN1-202ENST00000380707 PDGFBP01127 241 aaPredicted RBP13□□□□□ -0.33
SMN1-202ENST00000380707 EGFP01133 1207 aa13□□□□□ -0.33
SMN1-202ENST00000380707 RHOCP08134 193 aa13□□□□□ -0.33
SMN1-202ENST00000380707 PYGMP11217 842 aa13□□□□□ -0.33
SMN1-202ENST00000380707 CSKP41240 450 aa13□□□□□ -0.33
SMN1-202ENST00000380707 CDKN2BP42772 138 aa13□□□□□ -0.33
SMN1-202ENST00000380707 MAPKAPK2P49137 400 aa13□□□□□ -0.33
SMN1-202ENST00000380707 GRSF1Q12849 480 aaKnown RBP eCLIP13□□□□□ -0.33
SMN1-202ENST00000380707 LLGL1Q15334 1064 aa13□□□□□ -0.33
SMN1-202ENST00000380707 TAZQ16635 292 aa13□□□□□ -0.33
SMN1-202ENST00000380707 C6orf118Q5T5N4 469 aa13□□□□□ -0.33
SMN1-202ENST00000380707 DCAF12L1Q5VU92 463 aa13□□□□□ -0.33
SMN1-202ENST00000380707 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
SMN1-202ENST00000380707 ADIPOR2Q86V24 386 aa13□□□□□ -0.33
SMN1-202ENST00000380707 VSIG1Q86XK7 387 aa13□□□□□ -0.33
SMN1-202ENST00000380707 APCDD1Q8J025 514 aa13□□□□□ -0.33
SMN1-202ENST00000380707 SLC35F6Q8N357 371 aa13□□□□□ -0.33
SMN1-202ENST00000380707 PQLC3Q8N755 202 aa13□□□□□ -0.33
SMN1-202ENST00000380707 DDX51Q8N8A6 666 aaKnown RBP eCLIP13□□□□□ -0.33
SMN1-202ENST00000380707 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
SMN1-202ENST00000380707 NETO2Q8NC67 525 aa13□□□□□ -0.33
SMN1-202ENST00000380707 ALG14Q96F25 216 aa13□□□□□ -0.33
SMN1-202ENST00000380707 RNF157Q96PX1 679 aa13□□□□□ -0.33
SMN1-202ENST00000380707 FEM1AQ9BSK4 669 aa13□□□□□ -0.33
SMN1-202ENST00000380707 TLR10Q9BXR5 811 aa13□□□□□ -0.33
SMN1-202ENST00000380707 FOXQ1Q9C009 403 aa13□□□□□ -0.33
SMN1-202ENST00000380707 KLC2Q9H0B6 622 aa13□□□□□ -0.33
SMN1-202ENST00000380707 NOL6Q9H6R4 1146 aaKnown RBP13□□□□□ -0.33
SMN1-202ENST00000380707 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
SMN1-202ENST00000380707 KIAA1522Q9P206 1035 aaPredicted RBP13□□□□□ -0.33
SMN1-202ENST00000380707 INTS6Q9UL03 887 aaKnown RBP13□□□□□ -0.33
SMN1-202ENST00000380707 NDRG2Q9UN36 371 aaKnown RBP13□□□□□ -0.33
SMN1-202ENST00000380707 ZKSCAN5Q9Y2L8 839 aa13□□□□□ -0.33
SMN1-202ENST00000380707 OR51B4Q9Y5P0 310 aa13□□□□□ -0.33
SMN1-202ENST00000380707 TECTAO75443 2155 aa13□□□□□ -0.33
SMN1-202ENST00000380707 ILVBLA1L0T0 632 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 TNFRSF10AO00220 468 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 ENC1O14682 589 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 APODP05090 189 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 PABPC1P11940 636 aaKnown RBP12.99□□□□□ -0.33
SMN1-202ENST00000380707 KRT10P13645 584 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 DRD1P21728 446 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 TARSP26639 723 aaKnown RBP12.99□□□□□ -0.33
SMN1-202ENST00000380707 ADCY2Q08462 1091 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 CCINQ13939 588 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 RPS6KA1Q15418 735 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 FUT11Q495W5 492 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 PREPLQ4J6C6 727 aaPredicted RBP12.99□□□□□ -0.33
SMN1-202ENST00000380707 AADACL2Q6P093 401 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 SPOCD1Q6ZMY3 1216 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 CCDC50Q8IVM0 306 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 SUGP1Q8IWZ8 645 aaKnown RBP12.99□□□□□ -0.33
SMN1-202ENST00000380707 UMODL1-AS1Q8N2C9 162 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 NPWQ8N729 165 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 RBM41Q96IZ5 413 aaKnown RBP12.99□□□□□ -0.33
SMN1-202ENST00000380707 MUC3BQ9H195 1237 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 LTB4R2Q9NPC1 389 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 JRKLQ9Y4A0 524 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 DMDP11532 3685 aa12.99□□□□□ -0.33
SMN1-202ENST00000380707 FAM170BA6NMN3 283 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 STK25O00506 426 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 RAMP2O60895 175 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 TNFRSF4P43489 277 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 PLK1P53350 603 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 GNA12Q03113 381 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ZNF211Q13398 564 aaPredicted RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 FZD5Q13467 585 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 UBXN2BQ14CS0 331 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 POLD3Q15054 466 aaPredicted RBP12.98□□□□□ -0.33
SMN1-202ENST00000380707 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 PITRM1Q5JRX3 1037 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 AFMIDQ63HM1 303 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 TMCO3Q6UWJ1 677 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 ZNF783Q6ZMS7 281 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 TP53INP2Q8IXH6 220 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 OR7D4Q8NG98 312 aa12.98□□□□□ -0.33
SMN1-202ENST00000380707 UBE2Q2Q8WVN8 375 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms