RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GPRC5AQ8NFJ5 357 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 KLHL8Q9P2G9 620 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 PRKAG3Q9UGI9 489 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 ATP2C2O75185 946 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 MAFO75444 373 aaPredicted RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 R3HCC1LQ7Z5L2 792 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 NOL6Q9H6R4 1146 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 NOD1Q9Y239 953 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RPS6KL1Q9Y6S9 549 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 STX7O15400 261 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 CFL1P23528 166 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 KDELR1P24390 212 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TGM3Q08188 693 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SCARF1Q14162 830 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RGS21Q2M5E4 152 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 RBM48Q5RL73 367 aaKnown RBP5.04□□□□□ -1.6
PCDH9-201ENST00000377861 DHDDSQ86SQ9 333 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 SCML4Q8N228 414 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TSPAN14Q8NG11 270 aa5.04□□□□□ -1.6
PCDH9-201ENST00000377861 TGFB1I1O43294 461 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 TAF6P49848 677 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 MTF1Q14872 753 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 UNKQ9C0B0 810 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 DTNAQ9Y4J8 743 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ADCY1Q08828 1119 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 P3H2Q8IVL5 708 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SEPT5Q99719 369 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PCDHA2Q9Y5H9 948 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 GSTT1P30711 240 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PCSK9Q8NBP7 692 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ZFP28Q8NHY6 868 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 DCTN4Q9UJW0 460 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 CHMP2AO43633 222 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 FGF4P08620 206 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RHBDL3P58872 404 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 IL2P60568 153 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PMM1Q92871 262 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 NTAN1Q96AB6 310 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SERPINB11Q96P15 392 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ADPRHL2Q9NX46 363 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 NDUFS3O75489 264 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SERPINF2P08697 491 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 EFNA1P20827 205 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 MATKP42679 507 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ASMTP46597 345 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 CCDC97Q96F63 343 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RBM4BQ9BQ04 359 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RBM4Q9BWF3 364 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 KLF15Q9UIH9 416 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 BHMG1C9JSJ3 638 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 TSPAN1O60635 241 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ARHGAP17Q68EM7 881 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 METTL25Q8N6Q8 603 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ACSBG1Q96GR2 724 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 AP4E1Q9UPM8 1137 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ZBBXA8MT70 800 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SLC16A2P36021 539 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ABL2P42684 1182 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PPP2R2DQ66LE6 453 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SLC27A1Q6PCB7 646 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 AIFM3Q96NN9 605 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 VWA7Q9Y334 891 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SMIM23A6NLE4 172 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 CD9P21926 228 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RFC1P35251 1148 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 GMFBP60983 142 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RPS6P62753 249 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ZNF568Q3ZCX4 644 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 NEPROQ6NW34 567 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 TP53BP2Q13625 1128 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SQLEQ14534 574 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 SPOPLQ6IQ16 392 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 GPR65Q8IYL9 337 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 HEMGNQ9BXL5 484 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 FTHL17Q9BXU8 183 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PRKCBP05771 671 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 LRRC36Q1X8D7 754 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RETSATQ6NUM9 610 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 OTCP00480 354 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ATP4AP20648 1035 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 MSANTD1Q6ZTZ1 278 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 FAM149B1Q96BN6 582 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RHOBTB2Q9BYZ6 727 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 INTS10Q9NVR2 710 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 GIT1Q9Y2X7 761 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 LIN52Q52LA3 116 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 MRI1Q9BV20 369 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 NEK6Q9HC98 313 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 DPP3Q9NY33 737 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PHGDHO43175 533 aaKnown RBP5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PRKCHP24723 683 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 ZBED5Q49AG3 693 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 MARC1Q5VT66 337 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 STRA8Q7Z7C7 330 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 RHOJQ9H4E5 214 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 MRC1P22897 1456 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 PSMG1O95456 288 aa5.03□□□□□ -1.6
PCDH9-201ENST00000377861 BCL10O95999 233 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms