RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 MKS1Q9NXB0 559 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 BFARQ9NZS9 450 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SLC39A10Q9ULF5 831 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 SOX13Q9UN79 622 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 PLA2G4CQ9UP65 541 aa16.63■□□□□ 0.25
TRIM27-202ENST00000377199 A0A096LPK6 155 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 MYBPHLA2RUH7 354 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 IL1BP01584 269 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 MYCNP04198 464 aaPredicted RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 CTSHP09668 335 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 FAM200BP0CF97 657 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 ANPEPP15144 967 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 CNTFP26441 200 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 IDH3AP50213 366 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 PDPK2PQ6A1A2 396 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 RWDD4Q6NW29 188 aaKnown RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 HASPINQ8TF76 798 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 MMADHCQ9H3L0 296 aaPredicted RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 ABHD16BQ9H3Z7 469 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 TMEM30AQ9NV96 361 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 RPL26L1Q9UNX3 145 aaKnown RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 KIF1CO43896 1103 aaKnown RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 JCHAINP01591 159 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 PRKCGP05129 697 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 NFKB1P19838 968 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 GARSP41250 739 aaKnown RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 ATXN3P54252 364 aaPredicted RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 ZBTB17Q13105 803 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 DNAL1Q4LDG9 190 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 RNF220Q5VTB9 566 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 STEAP4Q687X5 459 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 NAPRTQ6XQN6 538 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.62■□□□□ 0.252e-6■■■■■ 95.3
TRIM27-202ENST00000377199 NPY6RQ99463 290 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 NDE1Q9NXR1 346 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 CORO1CQ9ULV4 474 aaPredicted RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 PHGDHO43175 533 aaKnown RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 DAB1O75553 588 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 LTFP02788 710 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 ADRA1BP35368 520 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 COPAP53621 1224 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 ABCE1P61221 599 aaKnown RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 TIFABQ6ZNK6 161 aa16.62■□□□□ 0.25
TRIM27-202ENST00000377199 EMID1Q96A84 441 aaPredicted RBP16.62■□□□□ 0.25
TRIM27-202ENST00000377199 CASTOR2A6NHX0 329 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 FYNP06241 537 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 MLNP12872 115 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 MX2P20592 715 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 SERPINB5P36952 375 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 MFSD10Q14728 455 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 NAIF1Q69YI7 327 aaPredicted RBP16.61■□□□□ 0.25
TRIM27-202ENST00000377199 ISLR2Q6UXK2 745 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 DEFB107AQ8IZN7 70 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 BRI3BPQ8WY22 251 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 NRCAMQ92823 1304 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 APBB2Q92870 758 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 MAGEC1O60732 1142 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 SERPINB6P35237 376 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 GLUD2P49448 558 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 TUBB3Q13509 450 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 ZNF460Q14592 562 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 OTOP3Q7RTS5 596 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 TLK2Q86UE8 772 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 HNRNPABQ99729 332 aaKnown RBP16.61■□□□□ 0.25
TRIM27-202ENST00000377199 WDR55Q9H6Y2 383 aaPredicted RBP16.61■□□□□ 0.25
TRIM27-202ENST00000377199 LRRC40Q9H9A6 602 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 COG4Q9H9E3 785 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 LRCH1Q9Y2L9 728 aa16.61■□□□□ 0.25
TRIM27-202ENST00000377199 A0A088AWK7 358 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 TK2O00142 265 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 DFFAO00273 331 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 XPOTO43592 962 aaKnown RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 CHRNGP07510 517 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 MSX2P35548 267 aaPredicted RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 PNPLA4P41247 253 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 RAP1GDS1P52306 607 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 AP2B1P63010 937 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 ZRSR2Q15696 482 aaKnown RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 SLC9B1Q4ZJI4 515 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 UBXN11Q5T124 520 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 HPS6Q86YV9 775 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 PSTKQ8IV42 348 aaKnown RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 SMG8Q8ND04 991 aaKnown RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 SPATA22Q8NHS9 363 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 PCED1BQ96HM7 432 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 SCYL1Q96KG9 808 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 GAD1Q99259 594 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 ZNF184Q99676 751 aaPredicted RBP16.6■□□□□ 0.25
TRIM27-202ENST00000377199 APBA2Q99767 749 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 GORASP1Q9BQQ3 440 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 PAAF1Q9BRP4 392 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 TKTL2Q9H0I9 626 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 GDAP2Q9NXN4 497 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 NUDT5Q9UKK9 219 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 ANGPTL2Q9UKU9 493 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 ZNF487B1APH4 448 aa16.6■□□□□ 0.25
TRIM27-202ENST00000377199 PTGESO14684 152 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms