RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 COLEC11Q9BWP8 271 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 ITGB3BPQ13352 177 aaPredicted RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 MTSS1LQ765P7 747 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 SAMD3Q8N6K7 520 aa10.01□□□□□ -0.81
SPEN-201ENST00000375759 TNPO3Q9Y5L0 923 aaKnown RBP10.01□□□□□ -0.81
SPEN-201ENST00000375759 ABLIM1O14639 778 aa10□□□□□ -0.81
SPEN-201ENST00000375759 NPTX2P47972 431 aa10□□□□□ -0.81
SPEN-201ENST00000375759 PTPN11Q06124 597 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 OLFML1Q6UWY5 402 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ILDR2Q71H61 639 aa10□□□□□ -0.81
SPEN-201ENST00000375759 DEPDC4Q8N2C3 294 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CKAP2Q8WWK9 683 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SMIM22K7EJ46 135 aa10□□□□□ -0.81
SPEN-201ENST00000375759 WWP2O00308 870 aa10□□□□□ -0.81
SPEN-201ENST00000375759 RPN2P04844 631 aa10□□□□□ -0.81
SPEN-201ENST00000375759 UQCRBP14927 111 aa10□□□□□ -0.81
SPEN-201ENST00000375759 HOXB6P17509 224 aaKnown RBP10□□□□□ -0.81
SPEN-201ENST00000375759 SSTR1P30872 391 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CDC42P60953 191 aa10□□□□□ -0.81
SPEN-201ENST00000375759 TBC1D16Q8TBP0 767 aa10□□□□□ -0.81
SPEN-201ENST00000375759 NUDT12Q9BQG2 462 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZCCHC2Q9C0B9 1178 aaKnown RBP10□□□□□ -0.81
SPEN-201ENST00000375759 DKK3Q9UBP4 350 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SH3GLB1Q9Y371 365 aa10□□□□□ -0.81
SPEN-201ENST00000375759 AK5Q9Y6K8 562 aa10□□□□□ -0.81
SPEN-201ENST00000375759 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 AKAP3O75969 853 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZNF7P17097 686 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 MILR1Q7Z6M3 343 aa10□□□□□ -0.81
SPEN-201ENST00000375759 GGA3Q9NZ52 723 aa10□□□□□ -0.81
SPEN-201ENST00000375759 VPS28Q9UK41 221 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ASTN2O75129 1339 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 PRKAR1AP10644 381 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CCR1P32246 355 aa10□□□□□ -0.81
SPEN-201ENST00000375759 GMFBP60983 142 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SRP54P61011 504 aaKnown RBP10□□□□□ -0.81
SPEN-201ENST00000375759 TROAPQ12815 778 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SQLEQ14534 574 aa10□□□□□ -0.81
SPEN-201ENST00000375759 IL22Q9GZX6 179 aa10□□□□□ -0.81
SPEN-201ENST00000375759 LRMDAQ9H2I8 198 aa10□□□□□ -0.81
SPEN-201ENST00000375759 EPB41L1Q9H4G0 881 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZNRF3Q9ULT6 936 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ADCY6O43306 1168 aa10□□□□□ -0.81
SPEN-201ENST00000375759 RPA3P35244 121 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 ZNF135P52742 658 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 NFIAQ12857 509 aa10□□□□□ -0.81
SPEN-201ENST00000375759 NT5DC3Q86UY8 548 aa10□□□□□ -0.81
SPEN-201ENST00000375759 RBM22Q9NW64 420 aaKnown RBP eCLIP10□□□□□ -0.815e-6■■■■■ 31.7
SPEN-201ENST00000375759 ERGIC3Q9Y282 383 aa10□□□□□ -0.81
SPEN-201ENST00000375759 USP32Q8NFA0 1604 aa10□□□□□ -0.81
SPEN-201ENST00000375759 GPR182O15218 404 aa10□□□□□ -0.81
SPEN-201ENST00000375759 NDUFB5O43674 189 aa10□□□□□ -0.81
SPEN-201ENST00000375759 FAM153BP0C7A2 387 aa10□□□□□ -0.81
SPEN-201ENST00000375759 RAB25P57735 213 aa10□□□□□ -0.81
SPEN-201ENST00000375759 FAM153CQ494X1 144 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CBWD3Q5JTY5 395 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CBWD5Q5RIA9 395 aa10□□□□□ -0.81
SPEN-201ENST00000375759 DHDDSQ86SQ9 333 aa10□□□□□ -0.81
SPEN-201ENST00000375759 BARX2Q9UMQ3 279 aaPredicted RBP10□□□□□ -0.81
SPEN-201ENST00000375759 DLC1Q96QB1 1528 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ACAT1P24752 427 aaKnown RBP10□□□□□ -0.81
SPEN-201ENST00000375759 STARP49675 285 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SKP1P63208 163 aa10□□□□□ -0.81
SPEN-201ENST00000375759 TRAP1Q12931 704 aaKnown RBP10□□□□□ -0.81
SPEN-201ENST00000375759 STARD3Q14849 445 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZNF470Q6ECI4 717 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CDC42EP5Q6NZY7 148 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZNF621Q6ZSS3 439 aa10□□□□□ -0.81
SPEN-201ENST00000375759 EIF3MQ7L2H7 374 aaKnown RBP10□□□□□ -0.81
SPEN-201ENST00000375759 FAM131BQ86XD5 332 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SEMA4DQ92854 862 aa10□□□□□ -0.81
SPEN-201ENST00000375759 MTMR8Q96EF0 704 aa10□□□□□ -0.81
SPEN-201ENST00000375759 GORASP1Q9BQQ3 440 aa10□□□□□ -0.81
SPEN-201ENST00000375759 NINJ2Q9NZG7 142 aa10□□□□□ -0.81
SPEN-201ENST00000375759 HAT1O14929 419 aa10□□□□□ -0.81
SPEN-201ENST00000375759 S100A3P33764 101 aa10□□□□□ -0.81
SPEN-201ENST00000375759 XIAPP98170 497 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZNF846Q147U1 533 aa10□□□□□ -0.81
SPEN-201ENST00000375759 PDCD10Q9BUL8 212 aa10□□□□□ -0.81
SPEN-201ENST00000375759 MED24O75448 989 aa10□□□□□ -0.81
SPEN-201ENST00000375759 ZNF24P17028 368 aa10□□□□□ -0.81
SPEN-201ENST00000375759 PDIA6Q15084 440 aa10□□□□□ -0.81
SPEN-201ENST00000375759 STK40Q8N2I9 435 aa10□□□□□ -0.81
SPEN-201ENST00000375759 SFRP1Q8N474 314 aa10□□□□□ -0.81
SPEN-201ENST00000375759 MCOLN3Q8TDD5 553 aa10□□□□□ -0.81
SPEN-201ENST00000375759 KCND1Q9NSA2 647 aa10□□□□□ -0.81
SPEN-201ENST00000375759 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
SPEN-201ENST00000375759 CHADO15335 359 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 GATAD2AQ86YP4 633 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 FBXW8Q8N3Y1 598 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 CARNMT1Q8N4J0 409 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 RACGAP1Q9H0H5 632 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 POMKQ9H5K3 350 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 HBS1LQ9Y450 684 aaKnown RBP9.99□□□□□ -0.81
SPEN-201ENST00000375759 C17orf102A2RUQ5 167 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 RHOCP08134 193 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 SLC26A3P40879 764 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 DDI2Q5TDH0 399 aa9.99□□□□□ -0.81
SPEN-201ENST00000375759 ARCQ7LC44 396 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms