RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 OSBPL2Q9H1P3 480 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 ABCC13Q9NSE7 274 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PRKAG3Q9UGI9 489 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 PHTF1Q9UMS5 762 aa8.42□□□□□ -1.06
UBR4-202ENST00000375224 FAM159BA6NKW6 160 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 AP3B1O00203 1094 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PDHA1P08559 390 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 ELNP15502 786 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 YWHAHQ04917 246 aaPredicted RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 DNAJC3Q13217 504 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 MTM1Q13496 603 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 KRT72Q14CN4 511 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 BRMS1LQ5PSV4 323 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 MAP3K21Q5TCX8 1036 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 STEAP4Q687X5 459 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 THOC7Q6I9Y2 204 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 ZNF449Q6P9G9 518 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 SLC24A5Q71RS6 500 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 ZNF534Q76KX8 674 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 DCP1BQ8IZD4 617 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 TCP10LQ8TDR4 215 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 SREK1Q8WXA9 508 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 TTC17Q96AE7 1141 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 GBP5Q96PP8 586 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PKMYT1Q99640 499 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 FTHL17Q9BXU8 183 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 TRMT13Q9NUP7 481 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 SEPT10Q9P0V9 454 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 MFHAS1Q9Y4C4 1052 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 TMEM189-UBE2V1I3L0A0 370 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 I3L4J1 428 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 COPEO14579 308 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PSMD3O43242 534 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 EDF1O60869 148 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 GNRH1P01148 92 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 COL6A1P12109 1028 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 CCND1P24385 295 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 TRPC1P48995 793 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 CACNA2D1P54289 1103 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PPIDQ08752 370 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 CD300LGQ6UXG3 332 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PID1Q7Z2X4 250 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 CHSY1Q86X52 802 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 ZNF75CPQ92670 426 aaPredicted RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 HDAC11Q96DB2 347 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 SEZ6LQ9BYH1 1024 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 TKTL2Q9H0I9 626 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 RXFP1Q9HBX9 757 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 RNF186Q9NXI6 227 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 KLHL8Q9P2G9 620 aaPredicted RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 OR12D3Q9UGF7 316 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 TRIM49D1C9J1S8 452 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 NAT2P11245 290 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 CKBP12277 381 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PGAM1P18669 254 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 WASHC5Q12768 1159 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PAN2Q504Q3 1202 aaKnown RBP8.41□□□□□ -1.06
UBR4-202ENST00000375224 BTBD8Q5XKL5 378 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 GRAMD4Q6IC98 578 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 BHLHA9Q7RTU4 235 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PEX5LQ8IYB4 626 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 ZNF567Q8N184 647 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.068e-7■□□□□ 9.4
UBR4-202ENST00000375224 ADAM32Q8TC27 787 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 ZNF398Q8TD17 642 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 DEPDC1BQ8WUY9 529 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 MKS1Q9NXB0 559 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 USH1CQ9Y6N9 552 aa8.41□□□□□ -1.06
UBR4-202ENST00000375224 CFAP73A6NFT4 308 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 DNM1LO00429 736 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 ALDH1A2O94788 518 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 C1QAP02745 245 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 CCDC166P0CW27 439 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 DNAJB2P25686 324 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 NEK3P51956 506 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 ARPC4P59998 168 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 NOMO2Q5JPE7 1267 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 CASC4Q6P4E1 433 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TMEM154Q6P9G4 183 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 FAM47EQ6ZV65 393 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TBC1D1Q86TI0 1168 aaPredicted RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 PRPF39Q86UA1 669 aaKnown RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 ARHGAP18Q8N392 663 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 LZTR1Q8N653 840 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 PDCD7Q8N8D1 485 aaKnown RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 RAET1EQ8TD07 263 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 LRRN4Q8WUT4 740 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 EDEM1Q92611 657 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 FAM193BQ96PV7 902 aaPredicted RBP8.4□□□□□ -1.06
UBR4-202ENST00000375224 HAPLN3Q96S86 360 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 CFHR5Q9BXR6 569 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TMPRSS4Q9NRS4 437 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 TMEM30AQ9NV96 361 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 MOCS1Q9NZB8 636 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 SCOCQ9UIL1 159 aa8.4□□□□□ -1.06
UBR4-202ENST00000375224 SLC12A4Q9UP95 1085 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms