RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GCOM2Q9BZD3 368 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 DHX35Q9H5Z1 703 aaKnown RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF195O14628 629 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 HBP1O60381 514 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CILPO75339 1184 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 DGKIO75912 1065 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CRTAMO95727 393 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 F7P08709 466 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MX2P20592 715 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MGAT1P26572 445 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 SCNN1BP51168 640 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 LAMTOR4Q0VGL1 99 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 FLOT2Q14254 428 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 STILQ15468 1287 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 SH2D4BQ5SQS7 431 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MAGEB5Q9BZ81 275 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 EPB41L1Q9H4G0 881 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 COPS7BQ9H9Q2 264 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 RPF1Q9H9Y2 349 aaKnown RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 ERAP1Q9NZ08 941 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 FLRT1Q9NZU1 646 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 C6orf203Q9P0P8 240 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 AP1G1O43747 822 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MAFO75444 373 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 GJB1P08034 283 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CYP2B6P20813 491 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CTGFP29279 349 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 TNFAIP2Q03169 654 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 SLC10A2Q12908 348 aaPredicted RBP11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MYBPC3Q14896 1274 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 STXBP5Q5T5C0 1151 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 ATF7IP2Q5U623 682 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 MPZL3Q6UWV2 235 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 SNX32Q86XE0 403 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 NETO2Q8NC67 525 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 CEP41Q9BYV8 373 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 ACSS2Q9NR19 701 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 TSPAN16Q9UKR8 245 aa11.35□□□□□ -0.59
CCDC40-203ENST00000374877 COL1A2P08123 1366 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 B4GALT4O60513 344 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 LGALS2P05162 132 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 ERVK-10P10266 1014 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 VDRP11473 427 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 PKNOX1P55347 436 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 RPL26P61254 145 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 C6orf52Q5T4I8 152 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 C12orf29Q8N999 325 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 MAPK15Q8TD08 544 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 OR52B2Q96RD2 323 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 CDRT15Q96T59 188 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 RTKNQ9BST9 563 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 GNEQ9Y223 722 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 CDY2AQ9Y6F7 541 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 MCM3APO60318 1980 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 DENRO43583 198 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 GCATO75600 419 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 PRKCGP05129 697 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 MLH1P40692 756 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 HDAC4P56524 1084 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 NIPAL4Q0D2K0 466 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 CBLBQ13191 982 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 MYLK3Q32MK0 819 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF484Q5JVG2 852 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 CEP70Q8NHQ1 597 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 ZFP28Q8NHY6 868 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 AFG1LQ8WV93 481 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 USP13Q92995 863 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 PGLYRP2Q96PD5 576 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 SERPINI1Q99574 410 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 MRPL1Q9BYD6 325 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 WDR55Q9H6Y2 383 aaPredicted RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 HSFX1Q9UBD0 423 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 IGKV6-21A0A0C4DH24 114 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 FBXO21O94952 628 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 TNFAIP8O95379 198 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 ACAT1P24752 427 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 HARS2P49590 506 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 THOP1P52888 689 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 ATXN1P54253 815 aaKnown RBP11.34□□□□□ -0.59
CCDC40-203ENST00000374877 HSP90AA5PQ58FG0 334 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 C4orf22Q6V702 233 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 FAM210AQ96ND0 272 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 CDH19Q9H159 772 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 TCF7L2Q9NQB0 619 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 AK5Q9Y6K8 562 aa11.34□□□□□ -0.59
CCDC40-203ENST00000374877 MMP3P08254 477 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 ENO3P13929 434 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 ALOX15P16050 662 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 DESP17661 470 aa11.33□□□□□ -0.6
CCDC40-203ENST00000374877 XRCC1P18887 633 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 TFE3P19532 575 aaPredicted RBP11.33□□□□□ -0.6
CCDC40-203ENST00000374877 CYP3A5P20815 502 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms