RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CTGFP29279 349 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 PPM1JQ5JR12 505 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 DCLRE1AQ6PJP8 1040 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 GIMAP7Q8NHV1 300 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 NKX1-2Q9UD57 310 aaPredicted RBP29.59■■■□□ 2.33
SSBP3-204ENST00000371320 SCN10AQ9Y5Y9 1956 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 GSC2O15499 205 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 DIAPH2O60879 1101 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 USP1O94782 785 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 RAB27AP51159 221 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 RINLQ6ZS11 566 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 RPAINQ86UA6 219 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 NUDCD1Q96RS6 583 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 TMLHEQ9NVH6 421 aa29.59■■■□□ 2.33
SSBP3-204ENST00000371320 CYP11A1P05108 521 aa29.58■■■□□ 2.33
SSBP3-204ENST00000371320 FGF3P11487 239 aaPredicted RBP29.58■■■□□ 2.33
SSBP3-204ENST00000371320 KCNA4P22459 653 aa29.58■■■□□ 2.33
SSBP3-204ENST00000371320 ANKRD20A4Q4UJ75 823 aa29.58■■■□□ 2.33
SSBP3-204ENST00000371320 DQX1Q8TE96 717 aaKnown RBP29.58■■■□□ 2.33
SSBP3-204ENST00000371320 HASPINQ8TF76 798 aa29.58■■■□□ 2.33
SSBP3-204ENST00000371320 CELF6Q96J87 481 aaKnown RBP29.58■■■□□ 2.33
SSBP3-204ENST00000371320 SDAD1Q9NVU7 687 aaKnown RBP eCLIP29.58■■■□□ 2.33
SSBP3-204ENST00000371320 ADAM28Q9UKQ2 775 aa29.58■■■□□ 2.33
SSBP3-204ENST00000371320 ARHGAP42A6NI28 874 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 JCHAINP01591 159 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 RPLP2P05387 115 aaKnown RBP29.57■■■□□ 2.32
SSBP3-204ENST00000371320 SPRP35270 261 aaPredicted RBP29.57■■■□□ 2.32
SSBP3-204ENST00000371320 FRG1Q14331 258 aaKnown RBP29.57■■■□□ 2.32
SSBP3-204ENST00000371320 CERCAMQ5T4B2 595 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 MFSD14CQ5VZR4 134 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 STRA8Q7Z7C7 330 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 TEKT5Q96M29 485 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 RBBP8Q99708 897 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 UPF3AQ9H1J1 476 aaKnown RBP29.57■■■□□ 2.32
SSBP3-204ENST00000371320 DSEQ9UL01 958 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 DNAH12Q6ZR08 3092 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 ZCWPW2A0A1B0GU75 182 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 ATP9BO43861 1147 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 PROCP04070 461 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 RPSAP08865 295 aaKnown RBP29.57■■■□□ 2.32
SSBP3-204ENST00000371320 NPY2RP49146 381 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 CRHR2Q13324 411 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 PCLAFQ15004 111 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 SCML4Q8N228 414 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 DCLK2Q8N568 766 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 MCUR1Q96AQ8 359 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 RILPQ96NA2 401 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 SNX15Q9NRS6 342 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 TAS2R1Q9NYW7 299 aa29.57■■■□□ 2.32
SSBP3-204ENST00000371320 MAGEB16A2A368 324 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 CAPN14A8MX76 684 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 ITM2AO43736 263 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 SLC1A6P48664 564 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 TEDDM1Q5T9Z0 273 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 RWDD4Q6NW29 188 aaKnown RBP29.56■■■□□ 2.32
SSBP3-204ENST00000371320 TLDC1Q6P9B6 456 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 C4orf50Q6ZRC1 276 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 APOL2Q9BQE5 337 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 TRIM62Q9BVG3 475 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 OSBPL2Q9H1P3 480 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 MAGED2Q9UNF1 606 aaPredicted RBP29.56■■■□□ 2.32
SSBP3-204ENST00000371320 INPP5FQ9Y2H2 1132 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 A0A0U1RQF3 1178 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 ATP5BP06576 529 aaKnown RBP29.56■■■□□ 2.32
SSBP3-204ENST00000371320 SRGAP2BP0DMP2 458 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 COG7P83436 770 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 PRPSAP1Q14558 356 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 RFWD3Q6PCD5 774 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 WDR75Q8IWA0 830 aaKnown RBP29.56■■■□□ 2.32
SSBP3-204ENST00000371320 TTC8Q8TAM2 541 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 SH3TC2Q8TF17 1288 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 TMEM209Q96SK2 561 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 AGAP2Q99490 1192 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 PKMYT1Q99640 499 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 TMEM216Q9P0N5 145 aa29.56■■■□□ 2.32
SSBP3-204ENST00000371320 ENTPD5O75356 428 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 LYPLA1O75608 230 aaPredicted RBP29.55■■■□□ 2.32
SSBP3-204ENST00000371320 SERPINE1P05121 402 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 PRKCGP05129 697 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 SERPINB8P50452 374 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 CD300LGQ6UXG3 332 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 CMC1Q7Z7K0 106 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 LRRTM3Q86VH5 581 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 C10orf107Q8IVU9 208 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 OR10T2Q8NGX3 314 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 SCAMP5Q8TAC9 235 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 MFSD3Q96ES6 412 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 ATXN7L3BQ96GX2 97 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 SIKE1Q9BRV8 207 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 UBP1Q9NZI7 540 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 DNAJC16Q9Y2G8 782 aa29.55■■■□□ 2.32
SSBP3-204ENST00000371320 M0QZQ0 153 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 LIMK2P53671 638 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 INHBEP58166 350 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 GRIK3Q13003 919 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 HSP90AA5PQ58FG0 334 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 OVOS1Q6IE37 1185 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 RGMBQ6NW40 437 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 TREML1Q86YW5 311 aa29.54■■■□□ 2.32
SSBP3-204ENST00000371320 PIWIL2Q8TC59 973 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms