RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 DPYSQ14117 519 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 DPYSL3Q14195 570 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 ASTLQ6HA08 431 aaPredicted RBP15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 KATNAL2Q8IYT4 538 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 UCMAQ8WVF2 138 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CLDN23Q96B33 292 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CSPG4P5Q96PW8 444 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 IER2Q9BTL4 223 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 CALN1Q9BXU9 219 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 FOXQ1Q9C009 403 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 PRDM16Q9HAZ2 1276 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 PCDHA3Q9Y5H8 950 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 MYOFQ9NZM1 2061 aa15.96■□□□□ 0.15
PRPF38B-202ENST00000370022 LRRD1A4D1F6 860 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 K7EQS6 105 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 NPC1O15118 1278 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 EGFP01133 1207 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 KRT1P04264 644 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 TNNT1P13805 278 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 ERCC2P18074 760 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 AOC1P19801 751 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 RPS9P46781 194 aaKnown RBP15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 MESP2Q0VG99 397 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 GEN1Q17RS7 908 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 CWF19L1Q69YN2 538 aaKnown RBP15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 ADIPOR2Q86V24 386 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 REXO1L1PQ8IX06 675 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 UMODL1-AS1Q8N2C9 162 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 LZTR1Q8N653 840 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 UBL4BQ8N7F7 174 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 PBXIP1Q96AQ6 731 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 RBM41Q96IZ5 413 aaKnown RBP15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 FEM1AQ9BSK4 669 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 LMAN1LQ9HAT1 526 aa15.96■□□□□ 0.14
PRPF38B-202ENST00000370022 PRRT4C9JH25 899 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 RAMP2O60895 175 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 ZRANB2O95218 330 aaKnown RBP eCLIP15.95■□□□□ 0.141e-10■■■■□ 21
PRPF38B-202ENST00000370022 ATP5BP06576 529 aaKnown RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 POLR2EP19388 210 aaKnown RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 IL4RP24394 825 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 CSKP41240 450 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 YBEYP58557 167 aaPredicted RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 MRPS21P82921 87 aaKnown RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 GNA12Q03113 381 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 SULT2A1Q06520 285 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 PLEKHG6Q3KR16 790 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 HSF5Q4G112 596 aaPredicted RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 HS1BP3Q53T59 392 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 PITRM1Q5JRX3 1037 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 RCOR2Q8IZ40 523 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 EXD1Q8NHP7 514 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 RAPGEF5Q92565 580 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 EZH1Q92800 747 aaPredicted RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 TTC17Q96AE7 1141 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 FAF2Q96CS3 445 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 MUC3BQ9H195 1237 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 MAGEH1Q9H213 219 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 KLHL11Q9NVR0 708 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 ELOVL2Q9NXB9 296 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 DNAI1Q9UI46 699 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 PYCARDQ9ULZ3 195 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 MTF2Q9Y483 593 aaPredicted RBP15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 OR51B4Q9Y5P0 310 aa15.95■□□□□ 0.14
PRPF38B-202ENST00000370022 CXorf51AA0A1B0GTR3 108 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 PDGFBP01127 241 aaPredicted RBP15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 ASLP04424 464 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 CD48P09326 243 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 MSNP26038 577 aaKnown RBP15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 SERPINB6P35237 376 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 NDST2P52849 883 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 RWDD2BP57060 319 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 FZD5Q13467 585 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 PARP15Q460N3 678 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 FUT11Q495W5 492 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 ANKRD20A8PQ5CZ79 823 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 RNF219Q5W0B1 726 aaPredicted RBP15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 MBLAC2Q68D91 279 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 TMCO3Q6UWJ1 677 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 TRMT11Q7Z4G4 463 aaKnown RBP15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 ACDQ96AP0 544 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 HES6Q96HZ4 224 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 C2orf49Q9BVC5 232 aaPredicted RBP15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 C1QTNF1Q9BXJ1 281 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 CIPCQ9C0C6 399 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 KCND1Q9NSA2 647 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 NDFIP2Q9NV92 336 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 VPS28Q9UK41 221 aa15.94■□□□□ 0.14
PRPF38B-202ENST00000370022 C3orf70A6NLC5 250 aaPredicted RBP15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 DCLK1O15075 740 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 GPR37L1O60883 481 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 ATG13O75143 517 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 RNF40O75150 1001 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 FTCDO95954 541 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 HNRNPLP14866 589 aaKnown RBP eCLIP15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 KIR2DL1P43626 348 aaPredicted RBP15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 PEX5P50542 639 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 COPS2P61201 443 aa15.93■□□□□ 0.14
PRPF38B-202ENST00000370022 POLD3Q15054 466 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms