RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SHC3Q92529 594 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 RPL10LQ96L21 214 aaKnown RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 CRACR2AQ9BSW2 395 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 CCDC86Q9H6F5 360 aaKnown RBP16.53■□□□□ 0.24
CKS1B-202ENST00000368436 ASNSD1Q9NWL6 643 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 RWDD2AQ9UIY3 292 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 PCDHGC3Q9UN70 934 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 LHX6Q9UPM6 363 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 CEP83Q9Y592 693 aa16.53■□□□□ 0.24
CKS1B-202ENST00000368436 ANKRD11Q6UB99 2663 aaPredicted RBP16.52■□□□□ 0.24
CKS1B-202ENST00000368436 A0A1B0GVM2 712 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 TCAF2A6NFQ2 919 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 WNT1P04628 370 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 SLC2A3P11169 496 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 MZF1P28698 734 aaPredicted RBP16.52■□□□□ 0.24
CKS1B-202ENST00000368436 CCR1P32246 355 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 STK19P49842 368 aaPredicted RBP16.52■□□□□ 0.24
CKS1B-202ENST00000368436 C21orf59P57076 290 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 CDK17Q00537 523 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 SULT2A1Q06520 285 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 ELAVL3Q14576 367 aaKnown RBP16.52■□□□□ 0.24
CKS1B-202ENST00000368436 ARHGAP44Q17R89 818 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 EFHC1Q5JVL4 640 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 CXorf57Q6NSI4 855 aaKnown RBP16.52■□□□□ 0.24
CKS1B-202ENST00000368436 FRS2Q8WU20 508 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 FAM131CQ96AQ9 280 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 SKA1Q96BD8 255 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 CPXM1Q96SM3 734 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 FAM204AQ9H8W3 233 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.24
CKS1B-202ENST00000368436 TPX2Q9ULW0 747 aaKnown RBP16.52■□□□□ 0.24
CKS1B-202ENST00000368436 ZFYVE26Q68DK2 2539 aa16.52■□□□□ 0.23
CKS1B-202ENST00000368436 A0A1W2PR77 199 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 GTPBP10A4D1E9 387 aaKnown RBP16.51■□□□□ 0.23
CKS1B-202ENST00000368436 WNT9AO14904 365 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 HSF2BPO75031 334 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 PDGFRAP16234 1089 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 ABCB4P21439 1286 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 NNMTP40261 264 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 USP8P40818 1118 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 PSMD8P48556 350 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 ADPRHP54922 357 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 OXCT1P55809 520 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 IL9RQ01113 521 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 APBA1Q02410 837 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 SHBQ15464 509 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 RABGAP1LQ5R372 815 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 FBXL22Q6P050 247 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 GBP6Q6ZN66 633 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 CIR1Q86X95 450 aaPredicted RBP16.51■□□□□ 0.23
CKS1B-202ENST00000368436 IRF2BP1Q8IU81 584 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 GALNT15Q8N3T1 639 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 ALG14Q96F25 216 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 PPP1R13BQ96KQ4 1090 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 ELF4Q99607 663 aaPredicted RBP16.51■□□□□ 0.23
CKS1B-202ENST00000368436 DDIT4Q9NX09 232 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 KIAA1468Q9P260 1216 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 DKK4Q9UBT3 224 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 GPSM3Q9Y4H4 160 aa16.51■□□□□ 0.23
CKS1B-202ENST00000368436 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 LATO43561 262 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 IL1BP01584 269 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 VAV1P15498 845 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 PON1P27169 355 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 CD38P28907 300 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 DRD3P35462 400 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 MTA1Q13330 715 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
CKS1B-202ENST00000368436 SMAD1Q15797 465 aaKnown RBP16.5■□□□□ 0.23
CKS1B-202ENST00000368436 INAVAQ3KP66 663 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 C11orf57Q6ZUT1 292 aaPredicted RBP16.5■□□□□ 0.23
CKS1B-202ENST00000368436 OR14C36Q8NHC7 312 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 SPAG5Q96R06 1193 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 OR51B4Q9Y5P0 310 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 DOCK9Q9BZ29 2069 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 CACNA1GO43497 2377 aa16.5■□□□□ 0.23
CKS1B-202ENST00000368436 DSPP15924 2871 aaKnown RBP16.49■□□□□ 0.23
CKS1B-202ENST00000368436 SLC7A4O43246 635 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 ATP9BO43861 1147 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 HOXB3P14651 431 aaPredicted RBP16.49■□□□□ 0.23
CKS1B-202ENST00000368436 CAMK2BQ13554 666 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 EXOC3L4Q17RC7 722 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 C5orf22Q49AR2 442 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 PRAMEF14Q5SWL7 426 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 OLFML1Q6UWY5 402 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 FAM183BPQ6ZVS7 135 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 ZNF397Q8NF99 534 aaPredicted RBP16.49■□□□□ 0.23
CKS1B-202ENST00000368436 OR52K2Q8NGK3 314 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 SAP25Q8TEE9 199 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 RNF34Q969K3 372 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 RPRD1AQ96P16 312 aaPredicted RBP16.49■□□□□ 0.23
CKS1B-202ENST00000368436 FEM1AQ9BSK4 669 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 KDM4CQ9H3R0 1056 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 SIX2Q9NPC8 291 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 AASDHPPTQ9NRN7 309 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 FTSJ1Q9UET6 329 aa16.49■□□□□ 0.23
CKS1B-202ENST00000368436 HS3ST4Q9Y661 456 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms