RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 NDUFV2P19404 249 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 PSMA2P25787 234 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 SLC18A3Q16572 532 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 FNDC3BQ53EP0 1204 aaKnown RBP23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 SCYL2Q6P3W7 929 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 SLFN11Q7Z7L1 901 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 PYROXD2Q8N2H3 581 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 MRGPRX1Q96LB2 322 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 FEM1AQ9BSK4 669 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 FZD10Q9ULW2 581 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 INVSQ9Y283 1065 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 NUP205Q92621 2012 aa23.08■■□□□ 1.29
ECHDC1-203ENST00000368291 AKR1B15C9JRZ8 316 aaPredicted RBP23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 MOCS3O95396 460 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 EPHX1P07099 455 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 GALCP54803 685 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 OXCT1P55809 520 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 CAMK2GQ13555 558 aaPredicted RBP23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 LPAL2Q16609 132 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 PRR23BQ6ZRT6 265 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 TFAP2DQ7Z6R9 452 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 TC2NQ8N9U0 490 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 RLN3Q8WXF3 142 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 ARHGEF26Q96DR7 871 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 MRFAP1L1Q96HT8 127 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 ZYG11BQ9C0D3 744 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 MKRN2Q9H000 416 aaKnown RBP23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 MRPL47Q9HD33 250 aaKnown RBP23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 BCCIPQ9P287 314 aaKnown RBP eCLIP23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 ERVW-1Q9UQF0 538 aa23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 TNRC6BQ9UPQ9 1833 aaKnown RBP23.07■■□□□ 1.28
ECHDC1-203ENST00000368291 LRIG2O94898 1065 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 CYP1A2P05177 515 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 P2RY2P41231 377 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 COPAP53621 1224 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 ECT2LQ008S8 904 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 STARD3Q14849 445 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 RNF219Q5W0B1 726 aaPredicted RBP23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 CYP4V2Q6ZWL3 525 aaPredicted RBP23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 KBTBD6Q86V97 674 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 CNGA4Q8IV77 575 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 FRMD1Q8N878 549 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 PEBP4Q96S96 227 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 PSMB7Q99436 277 aa23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 ZNHIT6Q9NWK9 470 aaKnown RBP23.06■■□□□ 1.28
ECHDC1-203ENST00000368291 SRPRAP08240 638 aaKnown RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 TSR1Q2NL82 804 aaKnown RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 MAP7D1Q3KQU3 841 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 USP39Q53GS9 565 aaKnown RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 CEP68Q76N32 757 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 SETD3Q86TU7 594 aaPredicted RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 NLRP14Q86W24 1093 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 PGBD3Q8N328 593 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 ZC3H10Q96K80 434 aaKnown RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 RPL10LQ96L21 214 aaKnown RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 PACSIN1Q9BY11 444 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 MTG2Q9H4K7 406 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 NHEJ1Q9H9Q4 299 aaPredicted RBP23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 CD93Q9NPY3 652 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 PRSS16Q9NQE7 514 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 SLCO3A1Q9UIG8 710 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 FRYLO94915 3013 aa23.05■■□□□ 1.28
ECHDC1-203ENST00000368291 A0A0D9SEW6 157 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 SYNCRIPO60506 623 aaKnown RBP23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 LRCH4O75427 683 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 RHOCP08134 193 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 C7P10643 843 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 BCKDHBP21953 392 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 STK19P49842 368 aaPredicted RBP23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 AIF1P55008 147 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 SEMA3BQ13214 749 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 FAM160A2Q8N612 972 aaPredicted RBP23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 KDM1BQ8NB78 822 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 DUSP15Q9H1R2 295 aaPredicted RBP23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 NDFIP2Q9NV92 336 aa23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 EP300Q09472 2414 aaPredicted RBP23.04■■□□□ 1.28
ECHDC1-203ENST00000368291 TTC34A8MYJ7 566 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 OR1E1P30953 314 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 L1CAMP32004 1257 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 PLK5Q496M5 336 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 EFHC2Q5JST6 749 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 DAB2IPQ5VWQ8 1189 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 TBC1D31Q96DN5 1066 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 BTBD6Q96KE9 485 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 NUP85Q9BW27 656 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 TMEM248Q9NWD8 314 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 GPATCH2LQ9NWQ4 482 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 MBD1Q9UIS9 605 aaPredicted RBP23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 VPS28Q9UK41 221 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 NUMA1Q14980 2115 aa23.03■■□□□ 1.28
ECHDC1-203ENST00000368291 RHOQP17081 205 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 DESP17661 470 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 MIPP30301 263 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 VASPP50552 380 aaPredicted RBP23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 ST8SIA6P61647 398 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 SULT2A1Q06520 285 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 CA9Q16790 459 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 HNRNPA1L2Q32P51 320 aaKnown RBP23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 C6orf118Q5T5N4 469 aa23.02■■□□□ 1.28
ECHDC1-203ENST00000368291 LAIR1Q6GTX8 287 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms