RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 STIP1P31948 543 aaKnown RBP9.76□□□□□ -0.85
VTA1-201ENST00000367621 ATP5OP48047 213 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 NTHL1P78549 312 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 SLC7A9P82251 487 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 COG7P83436 770 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 GALNT2Q10471 571 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 PPP1R7Q15435 360 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 SLC5A9Q2M3M2 681 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 ALFQ53S48 1182 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 PRSS36Q5K4E3 855 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 RAP1GAP2Q684P5 730 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 NUGGCQ68CJ6 796 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 TMCO3Q6UWJ1 677 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 RBM23Q86U06 439 aaKnown RBP9.76□□□□□ -0.85
VTA1-201ENST00000367621 TDHQ8IZJ6 230 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 FBXO25Q8TCJ0 367 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 CAVIN3Q969G5 261 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 P2RY11Q96G91 374 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 POM121Q96HA1 1249 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 PRDM12Q9H4Q4 367 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 MPP6Q9NZW5 540 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 AGO1Q9UL18 857 aaKnown RBP9.76□□□□□ -0.85
VTA1-201ENST00000367621 RAD54BQ9Y620 910 aa9.76□□□□□ -0.85
VTA1-201ENST00000367621 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 A0A1W2PRU2 124 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 CFAP69A5D8W1 941 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 C5orf60A6NFR6 353 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 SGK1O00141 431 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 MAP2K7O14733 419 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 FGF10O15520 208 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 GCATO75600 419 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 IFNB1P01574 187 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 RHOP08100 348 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 MBL2P11226 248 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 MYL4P12829 197 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 RHOQP17081 205 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 PTPN2P17706 415 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 HDCP19113 662 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ITIH2P19823 946 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 CDC25CP30307 473 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 CORO1AP31146 461 aaKnown RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 ADCY8P40145 1251 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 VPS41P49754 854 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 PLTPP55058 493 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 SMAD3P84022 425 aaKnown RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 WASHC5Q12768 1159 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 GPS1Q13098 491 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 MTA1Q13330 715 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 PDK1Q15118 436 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 P3H1Q32P28 736 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 TMEM259Q4ZIN3 620 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ACBD5Q5T8D3 534 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 RNASEH2BQ5TBB1 312 aaKnown RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 HIBCHQ6NVY1 386 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 RWDD4Q6NW29 188 aaKnown RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 EMBQ6PCB8 327 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 RFWD3Q6PCD5 774 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ARHGAP36Q6ZRI8 547 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 GSTA5Q7RTV2 222 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 DENND1CQ8IV53 801 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 CDKL3Q8IVW4 592 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 FAM217AQ8IXS0 508 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 UMODL1-AS1Q8N2C9 162 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 RTL3Q8N8U3 475 aaKnown RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 CCDC89Q8N998 374 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 RSAD2Q8WXG1 361 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.75□□□□□ -0.85
VTA1-201ENST00000367621 SNF8Q96H20 258 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 CELF6Q96J87 481 aaKnown RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 GDAP1L1Q96MZ0 367 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 FUT8Q9BYC5 575 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 SLC39A8Q9C0K1 460 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ATXN3LQ9H3M9 355 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 SLC28A3Q9HAS3 691 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 TRPC7Q9HCX4 862 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ARFGAP3Q9NP61 516 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ASAH2Q9NR71 780 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ARGLU1Q9NWB6 273 aaPredicted RBP9.75□□□□□ -0.85
VTA1-201ENST00000367621 TMEM248Q9NWD8 314 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 SMPD4Q9NXE4 827 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ZDHHC7Q9NXF8 308 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 ASIC3Q9UHC3 531 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 SLC12A6Q9UHW9 1150 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 VANGL2Q9ULK5 521 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 CPQQ9Y646 472 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 GREB1Q4ZG55 1949 aa9.75□□□□□ -0.85
VTA1-201ENST00000367621 TCRBV7S3A2A0A539 114 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 DNALI1O14645 258 aaPredicted RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 KCNN4O15554 427 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 ERLIN1O75477 346 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 PEX11BO96011 259 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 PFKLP17858 780 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 CHKAP35790 457 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 HSPA9P38646 679 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 GARSP41250 739 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 NRIP1P48552 1158 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 HARS2P49590 506 aaKnown RBP9.74□□□□□ -0.85
VTA1-201ENST00000367621 RGS19P49795 217 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 SGSHP51688 502 aa9.74□□□□□ -0.85
VTA1-201ENST00000367621 ITGA8P53708 1063 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms