RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 GDPD5Q8WTR4 605 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 PPP2R3CQ969Q6 453 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 SCLYQ96I15 445 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 PIWIL1Q96J94 861 aaKnown RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 CATSPER2Q96P56 530 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 LPIN3Q9BQK8 851 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 MTG1Q9BT17 334 aaPredicted RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 WWP1Q9H0M0 922 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 RNF39Q9H2S5 420 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 GPATCH2LQ9NWQ4 482 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 SNNO75324 88 aaPredicted RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 ERBB2P04626 1255 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 INHAP05111 366 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 VCLP18206 1134 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 EEF1DP29692 281 aaKnown RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 NAA20P61599 178 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 LSAMPQ13449 338 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 RBM44Q6ZP01 1051 aaKnown RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 CCDC80Q76M96 950 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 NIPA2Q8N8Q9 360 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 SHCBP1Q8NEM2 672 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 PPTC7Q8NI37 304 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 NAT14Q8WUY8 206 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 HAPLN3Q96S86 360 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 CGRRF1Q99675 332 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 C17orf75Q9HAS0 396 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 DDX28Q9NUL7 540 aaKnown RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 SEPT10Q9P0V9 454 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 ZC3H7BQ9UGR2 993 aaKnown RBP9.32□□□□□ -0.92
TOP1-201ENST00000361337 HMGXB4Q9UGU5 601 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 ST3GAL5Q9UNP4 418 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 DNAJC16Q9Y2G8 782 aa9.32□□□□□ -0.92
TOP1-201ENST00000361337 ARHGAP10A1A4S6 786 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ASS1P00966 412 aaKnown RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 APRTP07741 180 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 SNRPAP09012 282 aaKnown RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 VAV1P15498 845 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ZNF792Q3KQV3 632 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 EFHC1Q5JVL4 640 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 TRNP1Q6NT89 227 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 TAPT1Q6NXT6 567 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ACAD11Q709F0 780 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ZNF296Q8WUU4 475 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 HSPBAP1Q96EW2 488 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 CCT7Q99832 543 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 MAGEB5Q9BZ81 275 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 KLHL4Q9C0H6 718 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 SIK2Q9H0K1 926 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ACSS2Q9NR19 701 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 UTP6Q9NYH9 597 aaKnown RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 IL1RAPL1Q9NZN1 696 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 SELENONQ9NZV5 590 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 SOX13Q9UN79 622 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 COL2A1P02458 1487 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 CAPN8A6NHC0 703 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 APOC4-APOC2K7ER74 178 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ADCY6O43306 1168 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ATG7O95352 703 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 KRT75O95678 551 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 IL1BP01584 269 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 APOC2P02655 101 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 TBXAS1P24557 533 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 MSX2P35548 267 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 CLCN2P51788 898 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 HNRNPDQ14103 355 aaKnown RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 HIC1Q14526 733 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 TAZQ16635 292 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 C15orf59Q2T9L4 293 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 UNC5AQ6ZN44 842 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 CRLF3Q8IUI8 442 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 MOCOSQ96EN8 888 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 PLEKHG4BQ96PX9 1271 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 OXCT2Q9BYC2 517 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 PNPOQ9NVS9 261 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 HEY1Q9Y5J3 304 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 H7C0C1 242 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 KCNN4O15554 427 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 FKTNO75072 461 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 BPGMP07738 259 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 SERPINA6P08185 405 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 HMBSP08397 361 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 RAG1P15918 1043 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 RBL1P28749 1068 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ATP5OP48047 213 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 SLC26A2P50443 739 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 CRADDP78560 199 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 RBP5P82980 135 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ROR1Q01973 937 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ITGA7Q13683 1181 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 KRT81Q14533 505 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 DNAL1Q4LDG9 190 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 CYP4V2Q6ZWL3 525 aaPredicted RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 NETO2Q8NC67 525 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 ACO2Q99798 780 aaKnown RBP9.31□□□□□ -0.92
TOP1-201ENST00000361337 USP29Q9HBJ7 922 aa9.31□□□□□ -0.92
TOP1-201ENST00000361337 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.31□□□□□ -0.92
TOP1-201ENST00000361337 HSFX1Q9UBD0 423 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms