RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 C4orf50Q6ZRC1 276 aa9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 RAPH1Q70E73 1250 aa9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 STRA8Q7Z7C7 330 aa9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 CRTAC1Q9NQ79 661 aa9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 C20orf96Q9NUD7 363 aaPredicted RBP9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 ANGPTL2Q9UKU9 493 aa9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 TIMM13Q9Y5L4 95 aaPredicted RBP9.52□□□□□ -0.88
GTF3C2-202ENST00000359541 GOLGA4Q13439 2230 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 CASTOR2A6NHX0 329 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 H0Y3Z8 333 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 PLIN3O60664 434 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 HSPA4LO95757 839 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 C1QAP02745 245 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 RALBP11234 206 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 SCNN1GP51170 649 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 ALDH18A1P54886 795 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 RPL10AP62906 217 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 ZNF33AQ06730 810 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 MPP3Q13368 585 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 ARRDC4Q8NCT1 418 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 MYLPFQ96A32 169 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 UROC1Q96N76 676 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 CXorf56Q9H5V9 222 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 DNAJC16Q9Y2G8 782 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 GSC2O15499 205 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 CPA3P15088 417 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 CLCNKBP51801 687 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 TEX44Q53QW1 395 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 FAM161BQ96MY7 647 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 PTPN18Q99952 460 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 ACBD6Q9BR61 282 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 NMUR2Q9GZQ4 415 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 CPSF2Q9P2I0 782 aaKnown RBP9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 MGAMO43451 1857 aa9.52□□□□□ -0.89
GTF3C2-202ENST00000359541 MYBPHLA2RUH7 354 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 FGF10O15520 208 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 BEST1O76090 585 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ERVK-10P10266 1014 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 KCNMB4Q86W47 210 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SPATA2LQ8IUW3 424 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 EDEM1Q92611 657 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PTCD3Q96EY7 689 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 RBBP8Q99708 897 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SMOQ99835 787 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 MAGEB5Q9BZ81 275 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PIH1D1Q9NWS0 290 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SCN4AP35499 1836 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ARL5CA6NH57 179 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 NRP1O14786 923 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 LIMK2P53671 638 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PRKAA2P54646 552 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SLC12A2P55011 1212 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PITX1P78337 314 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 GALNT2Q10471 571 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 FRG1Q14331 258 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 BRMS1LQ5PSV4 323 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PDPK2PQ6A1A2 396 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 TIGD7Q6NT04 549 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PAQR9Q6ZVX9 377 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PPHLN1Q8NEY8 458 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 UTP4Q969X6 686 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 CADM1Q9BY67 442 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 KCNK13Q9HB14 408 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SNX15Q9NRS6 342 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SDK1Q7Z5N4 2213 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 DFFAO00273 331 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 SNNO75324 88 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 JCHAINP01591 159 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 NFKB1P19838 968 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 CXCR3P49682 368 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 GEMP55040 296 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 KDSRQ06136 332 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 GRIK3Q13003 919 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 PDE1CQ14123 709 aaPredicted RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 CCL14Q16627 93 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ANO4Q32M45 955 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 C16orf46Q6P387 395 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ZCCHC23Q6ZST2 131 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ALYREFQ86V81 257 aaKnown RBP9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ARMCX1Q9P291 453 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 ANKRD6Q9Y2G4 727 aa9.51□□□□□ -0.89
GTF3C2-202ENST00000359541 MAGEC1O60732 1142 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 PEX11AO75192 247 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 VHLP40337 213 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 THOC5Q13769 683 aaKnown RBP9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 PPP2R5DQ14738 602 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 CTC1Q2NKJ3 1217 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 TRMT5Q32P41 509 aaKnown RBP9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 ACCSLQ4AC99 568 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 ANKRD20A4Q4UJ75 823 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 LCA5Q86VQ0 697 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.5□□□□□ -0.891e-8■■■■■ 174
GTF3C2-202ENST00000359541 ENDOVQ8N8Q3 282 aaKnown RBP9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 CMTM5Q96DZ9 223 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 TRIM56Q9BRZ2 755 aaKnown RBP9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 FSD1LQ9BXM9 530 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 SIK2Q9H0K1 926 aa9.5□□□□□ -0.89
GTF3C2-202ENST00000359541 DENND2DQ9H6A0 471 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms