RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TTLL4Q14679 1199 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 NR0B2Q15466 257 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 TBCEQ15813 527 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAM171A1Q5VUB5 890 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 DGAT2L7PQ6IED9 249 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLCO4C1Q6ZQN7 724 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 C3orf62Q6ZUJ4 267 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ARHGAP27Q6ZUM4 889 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF572Q7Z3I7 529 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 LRRC56Q8IYG6 542 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZZZ3Q8IYH5 903 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 GRAMD1CQ8IYS0 662 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 OR8H3Q8N146 312 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ARL14Q8N4G2 192 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 PTGR2Q8N8N7 351 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 TBC1D5Q92609 795 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 MECRQ9BV79 373 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CRLF2Q9HC73 371 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 TIMMDC1Q9NPL8 285 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 TLR8Q9NR97 1041 aaKnown RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 OLA1Q9NTK5 396 aaKnown RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RCAN3Q9UKA8 241 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SLC8A2Q9UPR5 921 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 INVSQ9Y283 1065 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 DNAH12Q6ZR08 3092 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 LAMA5O15230 3695 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CHD5Q8TDI0 1954 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ANAPC1Q9H1A4 1944 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 A0A1W2PPQ1 181 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 hCG_1807616A0A1W2PRN6 198 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 A0A1W2PS29 197 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RNF222A6NCQ9 220 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 FYB1O15117 783 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 AP5Z1O43299 807 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SHOX2O60902 331 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SUN1O94901 812 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SNRPB2P08579 225 aaKnown RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 GCSHP23434 173 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 JAK1P23458 1154 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SKIV2L2P42285 1042 aaKnown RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 KCNJ12Q14500 433 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 COG2Q14746 738 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CHRNA2Q15822 529 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 PREPLQ4J6C6 727 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAAH2Q6GMR7 532 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 IYDQ6PHW0 289 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 USP53Q70EK8 1073 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RAB44Q7Z6P3 723 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 C8orf58Q8NAV2 365 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 METTL21AQ8WXB1 218 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CFAP57Q96MR6 1250 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 POLR3CQ9BUI4 534 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 GPR63Q9BZJ6 419 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 QRSL1Q9H0R6 528 aaKnown RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 S1PR5Q9H228 398 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZDHHC6Q9H6R6 413 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 WDCPQ9H6R7 721 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZNF701Q9NV72 531 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 PPP4R2Q9NY27 417 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 HSF4Q9ULV5 492 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RIC1Q4ADV7 1423 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 COL27A1Q8IZC6 1860 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ADGRF5Q8IZF2 1346 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ZSCAN9O15535 394 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 KLK8O60259 260 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 BEST1O76090 585 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CYP11B2P19099 503 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RPA1P27694 616 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CD6P30203 668 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCR1P32246 355 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RGS3P49796 1198 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CPT1AP50416 773 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SESN2P58004 480 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 GPX6P59796 221 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ITPK1Q13572 414 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 C1QL3Q5VWW1 255 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 NEK5Q6P3R8 708 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 PGM2L1Q6PCE3 622 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 ELMSAN1Q6PJG2 1045 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CAMKMTQ7Z624 323 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAM228AQ86W67 206 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 FAM129CQ86XR2 697 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CCDC13Q8IYE1 715 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SH2D3CQ8N5H7 860 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 KDM1BQ8NB78 822 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 OR14C36Q8NHC7 312 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 RNF138Q8WVD3 245 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CAVIN3Q969G5 261 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SPACA9Q96E40 222 aaPredicted RBP1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 PIGSQ96S52 555 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 NDC1Q9BTX1 674 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 CARD11Q9BXL7 1154 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SMARCAD1Q9H4L7 1026 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 LRRC4CQ9HCJ2 640 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 SOHLH2Q9NX45 425 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 VPS13CQ709C8 3753 aa1.99□□□□□ -2.09
SMARCAD1-202ENST00000359052 MEX3AA1L020 520 aaKnown RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 WTIPA6NIX2 430 aaPredicted RBP1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 RHPN2P1A8MT19 583 aa1.98□□□□□ -2.09
SMARCAD1-202ENST00000359052 KRT6BP04259 564 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms