RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TCP1P17987 556 aaKnown RBP26.07■■□□□ 1.76
SSBP3-202ENST00000357475 CD70P32970 193 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 ZNF177Q13360 481 aaPredicted RBP26.07■■□□□ 1.76
SSBP3-202ENST00000357475 CDH18Q13634 790 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 ARHGAP12Q8IWW6 846 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 RASGEF1CQ8N431 466 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 LMLNQ96KR4 655 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 TBC1D30Q9Y2I9 924 aa26.07■■□□□ 1.76
SSBP3-202ENST00000357475 A0A0D9SEW6 157 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 FGGP02679 453 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 MZF1P28698 734 aaPredicted RBP26.06■■□□□ 1.76
SSBP3-202ENST00000357475 HLA-FP30511 346 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 OPRD1P41143 372 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 LMAN2Q12907 356 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 PAFAH1B3Q15102 231 aaKnown RBP26.06■■□□□ 1.76
SSBP3-202ENST00000357475 BBS12Q6ZW61 710 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 RNF135Q8IUD6 432 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 CSGALNACT1Q8TDX6 532 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 HEBP1Q9NRV9 189 aa26.06■■□□□ 1.76
SSBP3-202ENST00000357475 DNAJC17Q9NVM6 304 aaKnown RBP26.06■■□□□ 1.76
SSBP3-202ENST00000357475 R3HDM2Q9Y2K5 976 aaKnown RBP26.06■■□□□ 1.76
SSBP3-202ENST00000357475 TULP3O75386 442 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 RHOCP08134 193 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 SRFP11831 508 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 ACVRL1P37023 503 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 MAPKAPK2P49137 400 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 TFDP2Q14188 446 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 AFMIDQ63HM1 303 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 B4GALNT4Q76KP1 1039 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 CREG2Q8IUH2 290 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 SFTPA1Q8IWL2 248 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 FIBINQ8TAL6 211 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 SLC39A8Q9C0K1 460 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 LRRC19Q9H756 370 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 FBXO10Q9UK96 956 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 EFR3BQ9Y2G0 817 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 HEY1Q9Y5J3 304 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 SHROOM3Q8TF72 1996 aa26.05■■□□□ 1.76
SSBP3-202ENST00000357475 CISD3P0C7P0 127 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 CETN2P41208 172 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 CSKP41240 450 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 SIX1Q15475 284 aaPredicted RBP26.04■■□□□ 1.76
SSBP3-202ENST00000357475 UMODL1-AS1Q8N2C9 162 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 OR7D4Q8NG98 312 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 ABCB8Q9NUT2 735 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 DTLQ9NZJ0 730 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 DUSP12Q9UNI6 340 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 PDE2AO00408 941 aaPredicted RBP26.04■■□□□ 1.76
SSBP3-202ENST00000357475 CES2O00748 559 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 URI1O94763 535 aaPredicted RBP26.04■■□□□ 1.76
SSBP3-202ENST00000357475 TJP3O95049 919 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 TUBB4AP04350 444 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 NR1H3Q13133 447 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 LONRF2Q1L5Z9 754 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 RNF219Q5W0B1 726 aaPredicted RBP26.04■■□□□ 1.76
SSBP3-202ENST00000357475 TXNDC11Q6PKC3 985 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 ARHGAP36Q6ZRI8 547 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 APCDD1Q8J025 514 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 ALG14Q96F25 216 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 HMCESQ96FZ2 354 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 FBRSL1Q9HCM7 1045 aaKnown RBP26.04■■□□□ 1.76
SSBP3-202ENST00000357475 TRPV5Q9NQA5 729 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 SLC2A4RGQ9NR83 387 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 INTS6Q9UL03 887 aaKnown RBP26.04■■□□□ 1.76
SSBP3-202ENST00000357475 OR51B4Q9Y5P0 310 aa26.04■■□□□ 1.76
SSBP3-202ENST00000357475 GNA12Q03113 381 aa26.03■■□□□ 1.76
SSBP3-202ENST00000357475 KDSRQ06136 332 aa26.03■■□□□ 1.76
SSBP3-202ENST00000357475 FAM182AQ5T1J6 154 aa26.03■■□□□ 1.76
SSBP3-202ENST00000357475 C6orf118Q5T5N4 469 aa26.03■■□□□ 1.76
SSBP3-202ENST00000357475 SETD3Q86TU7 594 aaPredicted RBP26.03■■□□□ 1.76
SSBP3-202ENST00000357475 PHTF2Q8N3S3 785 aa26.03■■□□□ 1.76
SSBP3-202ENST00000357475 DNASE1L2Q92874 299 aa26.03■■□□□ 1.76
SSBP3-202ENST00000357475 XPO6Q96QU8 1125 aaKnown RBP26.03■■□□□ 1.76
SSBP3-202ENST00000357475 ANTXRLA6NF34 631 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 RASA4BC9J798 803 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 DFFAO00273 331 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 RASA4O43374 803 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 RAMP2O60895 175 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 GLDCP23378 1020 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 DGKGP49619 791 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 GEN1Q17RS7 908 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.02■■□□□ 1.762e-6■■■□□ 17
SSBP3-202ENST00000357475 KIF18AQ8NI77 898 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 ACTRT1Q8TDG2 376 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 ATG4AQ8WYN0 398 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 ARHGEF2Q92974 986 aaKnown RBP26.02■■□□□ 1.76
SSBP3-202ENST00000357475 FEM1AQ9BSK4 669 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 TTC7AQ9ULT0 858 aaPredicted RBP26.02■■□□□ 1.76
SSBP3-202ENST00000357475 SORCS3Q9UPU3 1222 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 PIAS3Q9Y6X2 628 aa26.02■■□□□ 1.76
SSBP3-202ENST00000357475 ILVBLA1L0T0 632 aa26.01■■□□□ 1.75
SSBP3-202ENST00000357475 SHISA7A6NL88 538 aa26.01■■□□□ 1.75
SSBP3-202ENST00000357475 SPECC1L-ADORA2AF8WAN1 911 aa26.01■■□□□ 1.75
SSBP3-202ENST00000357475 ZFXP17010 805 aaPredicted RBP26.01■■□□□ 1.75
SSBP3-202ENST00000357475 TGM2P21980 687 aa26.01■■□□□ 1.75
SSBP3-202ENST00000357475 CTHP32929 405 aa26.01■■□□□ 1.75
SSBP3-202ENST00000357475 PAPOLAP51003 745 aaKnown RBP26.01■■□□□ 1.75
SSBP3-202ENST00000357475 NDST2P52849 883 aa26.01■■□□□ 1.75
SSBP3-202ENST00000357475 OTUD4Q01804 1114 aaKnown RBP26.01■■□□□ 1.75
SSBP3-202ENST00000357475 POLD3Q15054 466 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms