RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FBXO44Q9H4M3 255 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 GSTK1Q9Y2Q3 226 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 SPEF1Q9Y4P9 236 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 PDE9AO76083 593 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 SGPL1O95470 568 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 PPM1AP35813 382 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 GTF3C2Q8WUA4 911 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-201ENST00000356083 DMGDHQ9UI17 866 aaKnown RBP17.54■□□□□ 0.4
COL27A1-201ENST00000356083 HMGXB3Q12766 1538 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 KCNH1O95259 989 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 NTSP30990 170 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 SGSM3Q96HU1 749 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 FASP25445 335 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 TRAF3Q13114 568 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 TERF2Q15554 542 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 NKD1Q969G9 470 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 FAM84BQ96KN1 310 aaPredicted RBP17.54■□□□□ 0.4
COL27A1-201ENST00000356083 KLHL4Q9C0H6 718 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 ATG10Q9H0Y0 220 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 PHTF1Q9UMS5 762 aa17.54■□□□□ 0.4
COL27A1-201ENST00000356083 PPP2R2BQ00005 443 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 TRAP1Q12931 704 aaKnown RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PYDC2Q56P42 97 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ARMC8Q8IUR7 673 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 NSMCE2Q96MF7 247 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 NCKIPSDQ9NZQ3 722 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PSMD13Q9UNM6 376 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 CYP2A6P11509 494 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 AQP5P55064 265 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PRR5LQ6MZQ0 368 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 FAM126BQ8IXS8 530 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 RORBQ92753 470 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ALDH8A1Q9H2A2 487 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 CCDC177Q9NQR7 707 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 VHLP40337 213 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 BUD31P41223 144 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 DLG1Q12959 904 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 CNSTQ6PJW8 725 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 WDR24Q96S15 920 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 CYP2R1Q6VVX0 501 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 APOL4Q9BPW4 351 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 VCPKMTQ9H867 229 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ADPRHL2Q9NX46 363 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PHF24Q9UPV7 400 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 DRG1Q9Y295 367 aaKnown RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 H7C0S8 307 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PPP1R37O75864 691 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 PDHBP11177 359 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 BDNFP23560 247 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 RPA3P35244 121 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 RFX4Q33E94 735 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF697Q5TEC3 545 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 C16orf46Q6P387 395 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 SERPINA13PQ6UXR4 307 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 EMC1Q8N766 993 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF780BQ9Y6R6 833 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 COX7A2P14406 83 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 C4orf22Q6V702 233 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF483Q8TF39 744 aaPredicted RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 INTS7Q9NVH2 962 aaKnown RBP17.53■□□□□ 0.4
COL27A1-201ENST00000356083 ELOVL2Q9NXB9 296 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
COL27A1-201ENST00000356083 KDM6AO15550 1401 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 IL1R1P14778 569 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 MC1RQ01726 317 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 RASA2Q15283 850 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 PYHIN1Q6K0P9 492 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 MSANTD1Q6ZTZ1 278 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 KBTBD7Q8WVZ9 684 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 SMPDL3BQ92485 455 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 REPS1Q96D71 796 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 GAS2L1Q99501 681 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 NUAK2Q9H093 628 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 EQTNQ9NQ60 294 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.52■□□□□ 0.46e-13■■□□□ 11.5
COL27A1-201ENST00000356083 MAPKBP1O60336 1514 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 RGS20O76081 388 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 FAM86B2P0C5J1 330 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 NR2F1P10589 423 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF7P17097 686 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 PLA2G4EQ3MJ16 856 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 MPPE1Q53F39 396 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 BPIFA1Q9NP55 256 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 RPS6KA6Q9UK32 745 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 ATXN2Q99700 1313 aaKnown RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 CASZ1Q86V15 1759 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 SLC16A3O15427 465 aaKnown RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 NOS1APO75052 506 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 COILP38432 576 aaPredicted RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 FASTKQ14296 549 aaKnown RBP17.52■□□□□ 0.4
COL27A1-201ENST00000356083 ZNF846Q147U1 533 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 SLC39A12Q504Y0 691 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 SLC22A9Q8IVM8 553 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 KLHL32Q96NJ5 620 aa17.52■□□□□ 0.4
COL27A1-201ENST00000356083 TRIM9Q9C026 710 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms