RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 C16orf89Q6UX73 402 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 HTR3CQ8WXA8 447 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 RPL10LQ96L21 214 aaKnown RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 GGA3Q9NZ52 723 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 NFASCO94856 1347 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 FAM159BA6NKW6 160 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 PDLIM1O00151 329 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 TRIM13O60858 407 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF189O75820 626 aaPredicted RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 GRK2P25098 689 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 GRIA4P48058 902 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 MTTPP55157 894 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 EN1Q05925 392 aaPredicted RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 SNAPC2Q13487 334 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 ADGRE1Q14246 886 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 CERCAMQ5T4B2 595 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 C16orf87Q6PH81 154 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 XKR5Q6UX68 686 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 CCDC185Q8N715 623 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 GIPC3Q8TF64 312 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 KCTD4Q8WVF5 259 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 GPRASP2Q96D09 838 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 ATXN3LQ9H3M9 355 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 RUVBL2Q9Y230 463 aaKnown RBP13.9□□□□□ -0.18
TRIM4-203ENST00000355947 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
TRIM4-203ENST00000355947 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 VAPBO95292 243 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 C2P06681 752 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 POLBP06746 335 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SETSIPP0DME0 302 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 STXBP2Q15833 593 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 AGKQ53H12 422 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 BOLA3Q53S33 107 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 LDLRAP1Q5SW96 308 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 PPP1R26Q5T8A7 1209 aaPredicted RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 DUS1LQ6P1R4 473 aaKnown RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 KBTBD6Q86V97 674 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 OFCC1Q8IZS5 231 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 NIPA2Q8N8Q9 360 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 KLHL32Q96NJ5 620 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 TRPC7Q9HCX4 862 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 NDUFA13Q9P0J0 144 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 EGFL7Q9UHF1 273 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SFMBT1Q9UHJ3 866 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 ZNF180Q9UJW8 692 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 C2CD4BA6NLJ0 364 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 EPHX2P34913 555 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 ARL1P40616 181 aaPredicted RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 YAP1P46937 504 aaKnown RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SLC5A3P53794 718 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 ESRRGP62508 458 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SEPT6Q14141 434 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 DCAF6Q58WW2 860 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 RSBN1LQ6PCB5 846 aaPredicted RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 ZBTB49Q6ZSB9 765 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SAMD7Q7Z3H4 446 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 C1orf21Q9H246 121 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SOX17Q9H6I2 414 aaPredicted RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 RSL24D1Q9UHA3 163 aaKnown RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 DMTF1Q9Y222 760 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 CDYLQ9Y232 598 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 STBD1O95210 358 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 HOXC6P09630 235 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 GPD2P43304 727 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 BAG6P46379 1132 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 SH3BGRP55822 239 aaPredicted RBP13.89□□□□□ -0.19
TRIM4-203ENST00000355947 ZNF280DQ6N043 979 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 PHF21BQ96EK2 531 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 KIF12Q96FN5 646 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 XYLT2Q9H1B5 865 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
TRIM4-203ENST00000355947 J3QRK9 145 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 MCF2P10911 925 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 IL4RP24394 825 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 GP5P40197 560 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 CBX3Q13185 183 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 GPR107Q5VW38 600 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 FSTL4Q6MZW2 842 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 TTC33Q6PID6 262 aaPredicted RBP13.88□□□□□ -0.19
TRIM4-203ENST00000355947 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 FBXL8Q96CD0 374 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 CERS2Q96G23 380 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 FAM210AQ96ND0 272 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 ACO2Q99798 780 aaKnown RBP13.88□□□□□ -0.19
TRIM4-203ENST00000355947 MRPS26Q9BYN8 205 aaKnown RBP13.88□□□□□ -0.19
TRIM4-203ENST00000355947 MINDY3Q9H8M7 445 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 PFDN4Q9NQP4 134 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 STK39Q9UEW8 545 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 PLOD2O00469 737 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 MFSD11O43934 449 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 STAG3L1P0CL83 205 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 CCDC130P13994 396 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 NR1H2P55055 460 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 PLIN5Q00G26 463 aa13.88□□□□□ -0.19
TRIM4-203ENST00000355947 HNRNPDQ14103 355 aaKnown RBP13.88□□□□□ -0.19
TRIM4-203ENST00000355947 ZNF534Q76KX8 674 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms