RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 EPOPA6NHQ4 379 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 KCNK1O00180 336 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 SMAPO00193 183 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 OPHN1O60890 802 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 CCNCP24863 283 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 NRIP1P48552 1158 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 PMS2P54278 862 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ZXDBP98169 803 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 DUSP6Q16828 381 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ARHGAP15Q53QZ3 475 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 GPR158Q5T848 1215 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 TDHQ8IZJ6 230 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 CFAP52Q8N1V2 620 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ZCCHC9Q8N567 271 aaKnown RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 UBLCP1Q8WVY7 318 aaPredicted RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 TCEAL4Q96EI5 215 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 TSGA13Q96PP4 275 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 SLC46A2Q9BY10 475 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 STOML2Q9UJZ1 356 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 DOCK6Q96HP0 2047 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 CHADO15335 359 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 POU2F2P09086 479 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 PTPN3P26045 913 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 DDX6P26196 483 aaKnown RBP eCLIP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 MAPKAPK2P49137 400 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 PAPOLAP51003 745 aaKnown RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 TEAD2Q15562 447 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 FAXCQ5TGI0 409 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ANKRD22Q5VYY1 191 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 CEP128Q6ZU80 1094 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 GRASPQ7Z6J2 395 aaPredicted RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 LRRC49Q8IUZ0 686 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 PRICKLE1Q96MT3 831 aaPredicted RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 PWWP2AQ96N64 755 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 CEP41Q9BYV8 373 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 RETREG1Q9H6L5 497 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 NOL6Q9H6R4 1146 aaKnown RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ETNK1Q9HBU6 452 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 DNAJC17Q9NVM6 304 aaKnown RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ZNF212Q9UDV6 495 aa13.97□□□□□ -0.17
HOXA1-202ENST00000355633 LSM7Q9UK45 103 aaKnown RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 ZFP37Q9Y6Q3 630 aaPredicted RBP13.97□□□□□ -0.17
HOXA1-202ENST00000355633 NYNRINQ9P2P1 1898 aaKnown RBP13.96□□□□□ -0.17
HOXA1-202ENST00000355633 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TCRBV7S3A2A0A539 114 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TRDMT1O14717 391 aaKnown RBP13.96□□□□□ -0.17
HOXA1-202ENST00000355633 MAFKO60675 156 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 MOSPD3O75425 235 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TMEM63AO94886 807 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 METTL18O95568 372 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 OR1E1P30953 314 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 HSD17B3P37058 310 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 KCNJ11Q14654 390 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 UAP1Q16222 522 aaPredicted RBP13.96□□□□□ -0.17
HOXA1-202ENST00000355633 SPDYCQ5MJ68 293 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 CFAP58Q5T655 872 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TIGD7Q6NT04 549 aaPredicted RBP13.96□□□□□ -0.17
HOXA1-202ENST00000355633 Q6ZNB5 142 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 ARHGAP36Q6ZRI8 547 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 PID1Q7Z2X4 250 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 ZNF567Q8N184 647 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TTC16Q8NEE8 873 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TIFAQ96CG3 184 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 VAT1Q99536 393 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 TASP1Q9H6P5 420 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 KLHL8Q9P2G9 620 aaPredicted RBP13.96□□□□□ -0.17
HOXA1-202ENST00000355633 SH3BP1Q9Y3L3 701 aa13.96□□□□□ -0.17
HOXA1-202ENST00000355633 CEP290O15078 2479 aa13.96□□□□□ -0.18
HOXA1-202ENST00000355633 HELZP42694 1942 aaKnown RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 ARHGAP42A6NI28 874 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 RASA4BC9J798 803 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 GOLGA8MH3BSY2 632 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 SCAMP3O14828 347 aaKnown RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 RASA4O43374 803 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 GREM1O60565 184 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 RAMP2O60895 175 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 FDFT1P37268 417 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 AVPR1AP37288 418 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 CDH4P55283 916 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 RPS24P62847 133 aaKnown RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 NTHL1P78549 312 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 SLC5A9Q2M3M2 681 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 ZNF707Q96C28 371 aaPredicted RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 CDCA3Q99618 268 aaPredicted RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 PIDD1Q9HB75 910 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 CFAP97Q9P2B7 532 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 NOTCH4Q99466 2003 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 GOLGA6BA6NDN3 693 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 RFXAPO00287 272 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 TSPAN3O60637 253 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 APRTP07741 180 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 YBEYP58557 167 aaPredicted RBP13.95□□□□□ -0.18
HOXA1-202ENST00000355633 ZBTB17Q13105 803 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 SEMA5AQ13591 1074 aa13.95□□□□□ -0.18
HOXA1-202ENST00000355633 HIF1AQ16665 826 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms