RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TMEM94Q12767 1356 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 H3BN98 237 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 HAT1O14929 419 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 HNRNPH3P31942 346 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 HARS2P49590 506 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 MYL6P60660 151 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZFP69Q49AA0 526 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 POP1Q99575 1024 aaKnown RBP12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLCO1B3Q9NPD5 702 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 NMRK2Q9NPI5 230 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 KLHL28Q9NXS3 571 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 TMEM216Q9P0N5 145 aa12.94□□□□□ -0.34
SYNCRIP-201ENST00000355238 NADKO95544 446 aaPredicted RBP12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 CLTBP09497 229 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ITGAXP20702 1163 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 SRP54P61011 504 aaKnown RBP12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 CSNK2BP67870 215 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 C5orf22Q49AR2 442 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 TRABD2AQ86V40 505 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZDHHC17Q8IUH5 632 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PIGUQ9H490 435 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ITGA11Q9UKX5 1188 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 SAGE2PA6NJ88 616 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ALDH1A1P00352 501 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ITGALP20701 1170 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 DEPDC4Q8N2C3 294 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PRELID2Q8N945 189 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 SEMA4DQ92854 862 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 BTBD9Q96Q07 612 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 CCNKO75909 580 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 TM7SF2O76062 418 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PRKAR1AP10644 381 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 FAM187BQ17R55 369 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 EFCAB12Q6NXP0 572 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PMF1Q6P1K2 205 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 HHIPL2Q6UWX4 724 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PTAR1Q7Z6K3 402 aaPredicted RBP12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 CLNKQ7Z7G1 428 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ALLCQ8N6M5 410 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 AP3S1Q92572 193 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLITRK2Q9H156 845 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACSS3Q9H6R3 686 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PCDHA11Q9Y5I1 949 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 DHRS12A0PJE2 317 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 HDAC3O15379 428 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 TMCC2O75069 709 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 CNPP09543 421 aaKnown RBP12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 HOXB6P17509 224 aaKnown RBP12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 IFNGR2P38484 337 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 NAA20P61599 178 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 LRRC38Q5VT99 294 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 MPZL3Q6UWV2 235 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 FAM131BQ86XD5 332 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 ARHGAP28Q9P2N2 729 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 LEF1Q9UJU2 399 aaPredicted RBP12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 A0A0B4J269 797 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 RCCD1A6NED2 376 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 A8MUI8 341 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 RGS14O43566 566 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 AKR1D1P51857 326 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 USP46P62068 366 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 NDUFAF6Q330K2 333 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 SLCO6A1Q86UG4 719 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 GSTCDQ8NEC7 633 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 PADI4Q9UM07 663 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 RAP2CQ9Y3L5 183 aa12.93□□□□□ -0.34
SYNCRIP-201ENST00000355238 LIASO43766 372 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ATP6V1G1O75348 118 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 CYP1A2P05177 515 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ADRA2BP18089 450 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ZIK1Q3SY52 487 aaPredicted RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 PYDC2Q56P42 97 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 NOTUMQ6P988 496 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 METTL6Q8TCB7 284 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 BAP1Q92560 729 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 Q96MT0 163 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 VCLP18206 1134 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACLYP53396 1101 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 PPP4CP60510 307 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ST8SIA6P61647 398 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 LSM3P62310 102 aaKnown RBP12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ACOT1Q86TX2 421 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 FAM47BQ8NA70 645 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 RDH11Q8TC12 318 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 GPRC5CQ9NQ84 441 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 VAPBO95292 243 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 POU6F1Q14863 301 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 FBXO30Q8TB52 745 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
SYNCRIP-201ENST00000355238 ETNK2Q9NVF9 386 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms