RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 C1orf54Q8WWF1 131 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 PGBD4Q96DM1 585 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 HEXIM2Q96MH2 286 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 TMEM209Q96SK2 561 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 CORO1BQ9BR76 489 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 HERPUD2Q9BSE4 406 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 COLEC11Q9BWP8 271 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 APOL6Q9BWW8 343 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 GTPBP2Q9BX10 602 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 NUSAP1Q9BXS6 441 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 SLC4A5Q9BY07 1137 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 TPSD1Q9BZJ3 242 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 FOXP3Q9BZS1 431 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SYNCQ9H7C4 482 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 CAPN10Q9HC96 672 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 METTL5Q9NRN9 209 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 GOLGA6AQ9NYA3 693 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 TSPAN16Q9UKR8 245 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 DRG1Q9Y295 367 aaKnown RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 NEU2Q9Y3R4 380 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 IPPQ9Y573 584 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 MUC22E2RYF6 1773 aaPredicted RBP8.52□□□□□ -1.05
CD44-205ENST00000352818 PCDH15Q96QU1 1955 aa8.52□□□□□ -1.05
CD44-205ENST00000352818 SETD2Q9BYW2 2564 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 VWA8A3KMH1 1905 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 LRBAP50851 2863 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 ARHGEF37A1IGU5 675 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 OTOL1A6NHN0 477 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 ZNF487B1APH4 448 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 GOLGA8SH3BPF8 625 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 PPEF2O14830 753 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 LIASO43766 372 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 OPHN1O60890 802 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 SHOX2O60902 331 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 LRCH4O75427 683 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 APBB3O95704 486 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 RARGP13631 454 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 C6P13671 934 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 PTPN2P17706 415 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 GPD1P21695 349 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 WARSP23381 471 aaKnown RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 IVDP26440 423 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 OR1D2P34982 312 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 RFC1P35251 1148 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 FLT3P36888 993 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 ZNF143P52747 638 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 BCAT1P54687 386 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 CALCOCO2Q13137 446 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 PPP1R7Q15435 360 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 SOWAHAQ2M3V2 549 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 GOLGA7BQ2TAP0 167 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 OLFML1Q6UWY5 402 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 MFSD7Q6UXD7 560 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 KDM7AQ6ZMT4 941 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 CEP128Q6ZU80 1094 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 ARMCX6Q7L4S7 300 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 GLRX5Q86SX6 157 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TMEM110Q86TL2 294 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 SYT12Q8IV01 421 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 HACE1Q8IYU2 909 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TMEM130Q8N3G9 435 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 HDDC3Q8N4P3 179 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TOP6BLQ8N6T0 577 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 CCDC89Q8N998 374 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 JOSD2Q8TAC2 188 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 C18orf25Q96B23 403 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 SNF8Q96H20 258 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 ATP6V1G3Q96LB4 118 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 PPP1R10Q96QC0 940 aaKnown RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 MRPL45Q9BRJ2 306 aaKnown RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 CNPY3Q9BT09 278 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TTPALQ9BTX7 342 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TMEM109Q9BVC6 243 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TRIM31Q9BZY9 425 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 PABPC3Q9H361 631 aaKnown RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 TMBIM4Q9HC24 238 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 SLC38A7Q9NVC3 462 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 DNAAF2Q9NVR5 837 aaKnown RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 ASNSD1Q9NWL6 643 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 KIAA1522Q9P206 1035 aaPredicted RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 HESX1Q9UBX0 185 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TJP2Q9UDY2 1190 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 PILRBQ9UKJ0 227 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 R3HDM2Q9Y2K5 976 aaKnown RBP8.51□□□□□ -1.05
CD44-205ENST00000352818 SNX24Q9Y343 169 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 SNX9Q9Y5X1 595 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 TSC2P49815 1807 aa8.51□□□□□ -1.05
CD44-205ENST00000352818 LRRD1A4D1F6 860 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ANTXRLA6NF34 631 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 GOLGA6L10A6NI86 522 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 C2CD4BA6NLJ0 364 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ENO4A6NNW6 628 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 KPNA7A9QM74 516 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 TNFRSF10BO14763 440 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ATG13O75143 517 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 RNF8O76064 485 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 ENDOD1O94919 500 aa8.5□□□□□ -1.05
CD44-205ENST00000352818 KRT14P02533 472 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms