RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PCYOX1Q9UHG3 505 aa27.78■■■□□ 2.04
SSBP4-202ENST00000348495 NUP205Q92621 2012 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 NCAM2O15394 837 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 RBP3P10745 1247 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 PSMC3P17980 439 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 IFNAR2P48551 515 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 ZNF177Q13360 481 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 TRIM68Q6AZZ1 485 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 CCDC137Q6PK04 289 aaKnown RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 ZC3H18Q86VM9 953 aaKnown RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 CCDC33Q8N5R6 958 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 OR52K2Q8NGK3 314 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 ZFYVE19Q96K21 471 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 RPP25Q9BUL9 199 aaKnown RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 PHF7Q9BWX1 381 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 DRG1Q9Y295 367 aaKnown RBP27.77■■■□□ 2.04
SSBP4-202ENST00000348495 CHD5Q8TDI0 1954 aa27.77■■■□□ 2.04
SSBP4-202ENST00000348495 C2CD4DB7Z1M9 353 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 SP100P23497 879 aaPredicted RBP27.76■■■□□ 2.03
SSBP4-202ENST00000348495 KCNJ1P48048 391 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 PDK1Q15118 436 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 PDGFRLQ15198 375 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 DHCR24Q15392 516 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 C6orf118Q5T5N4 469 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 DEPDC1BQ8WUY9 529 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 BHMTQ93088 406 aa27.76■■■□□ 2.03
SSBP4-202ENST00000348495 RAMP2O60895 175 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 CYP17A1P05093 508 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 ITGAVP06756 1048 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 MX2P20592 715 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 GARSP41250 739 aaKnown RBP27.75■■■□□ 2.03
SSBP4-202ENST00000348495 YBEYP58557 167 aaPredicted RBP27.75■■■□□ 2.03
SSBP4-202ENST00000348495 QKIQ96PU8 341 aaKnown RBP eCLIP27.75■■■□□ 2.03
SSBP4-202ENST00000348495 PLK2Q9NYY3 685 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 NUMBLQ9Y6R0 609 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 ILVBLA1L0T0 632 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 HACD1B0YJ81 288 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 ARSAP15289 507 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 PRKD1Q15139 912 aaPredicted RBP27.75■■■□□ 2.03
SSBP4-202ENST00000348495 PARP15Q460N3 678 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 FSCBQ5H9T9 825 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 CARNMT1Q8N4J0 409 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 WFDC5Q8TCV5 224 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 SLCO2A1Q92959 643 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 HDAC11Q96DB2 347 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 LGMNQ99538 433 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 BBS2Q9BXC9 721 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 BRD8Q9H0E9 1235 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 HPS4Q9NQG7 708 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 CLEC4EQ9ULY5 219 aa27.75■■■□□ 2.03
SSBP4-202ENST00000348495 MYOFQ9NZM1 2061 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 BCLAF3A2AJT9 711 aaKnown RBP27.74■■■□□ 2.03
SSBP4-202ENST00000348495 RASA4BC9J798 803 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 RASA4O43374 803 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 GNA12Q03113 381 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 PPIDQ08752 370 aaKnown RBP27.74■■■□□ 2.03
SSBP4-202ENST00000348495 GRM2Q14416 872 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 SLC45A4Q5BKX6 768 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 ZNF783Q6ZMS7 281 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 ATL2Q8NHH9 583 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 MAFAQ8NHW3 353 aaPredicted RBP27.74■■■□□ 2.03
SSBP4-202ENST00000348495 FIBINQ8TAL6 211 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 ATP2A3Q93084 1043 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 HMCESQ96FZ2 354 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 RUNDC3BQ96NL0 473 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 MAGEH1Q9H213 219 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 EBF3Q9H4W6 596 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 C10orf88Q9H8K7 445 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 AMACRQ9UHK6 382 aa27.74■■■□□ 2.03
SSBP4-202ENST00000348495 NEDD8-MDP1E9PL57 170 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 H0Y626 953 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 H7C0C1 242 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 DFFAO00273 331 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 PPP1R12AO14974 1030 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-202ENST00000348495 NFATC1O95644 943 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 ATP5OP48047 213 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 PAPOLAP51003 745 aaKnown RBP27.73■■■□□ 2.03
SSBP4-202ENST00000348495 POLD3Q15054 466 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-202ENST00000348495 PTCRAQ6ISU1 281 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-202ENST00000348495 B4GALNT4Q76KP1 1039 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 LRRC49Q8IUZ0 686 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 MFN1Q8IWA4 741 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 LRRN4Q8WUT4 740 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 TFB1MQ8WVM0 346 aaKnown RBP27.73■■■□□ 2.03
SSBP4-202ENST00000348495 TSGA13Q96PP4 275 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 TMEM121Q9BTD3 319 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 USP29Q9HBJ7 922 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 ZNF148Q9UQR1 794 aa27.73■■■□□ 2.03
SSBP4-202ENST00000348495 NYNRINQ9P2P1 1898 aaKnown RBP27.73■■■□□ 2.03
SSBP4-202ENST00000348495 A0A0D9SEW6 157 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 HOXC11O43248 304 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 RHOCP08134 193 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 TYRP14679 529 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 PTGIRP43119 386 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 ZNF33AQ06730 810 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 CDH18Q13634 790 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 ANO4Q32M45 955 aa27.72■■■□□ 2.03
SSBP4-202ENST00000348495 PUS10Q3MIT2 529 aaKnown RBP27.72■■■□□ 2.03
SSBP4-202ENST00000348495 DARS2Q6PI48 645 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms