RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 hCG_1818297A0A087WSY0 165 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 TCRBV9S1A1TA0A576 114 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 KLRK1P26718 216 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 RARRES1P49788 294 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 FCHO2Q0JRZ9 810 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 C3orf67Q6ZVT6 689 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 BRINP3Q76B58 766 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 ZNF605Q86T29 641 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 CYP4Z1Q86W10 505 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 UCMAQ8WVF2 138 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 L3MBTL3Q96JM7 780 aaPredicted RBP18.4■□□□□ 0.54
SMC4-201ENST00000344722 CLPTM1LQ96KA5 538 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
SMC4-201ENST00000344722 C3orf18Q9UK00 162 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 JCADQ9P266 1359 aa18.4■□□□□ 0.54
SMC4-201ENST00000344722 LGR5O75473 907 aa18.39■□□□□ 0.54
SMC4-201ENST00000344722 TRIM71Q2Q1W2 868 aaKnown RBP18.39■□□□□ 0.54
SMC4-201ENST00000344722 ZHX1-C8orf76Q96EF9 292 aa18.39■□□□□ 0.54
SMC4-201ENST00000344722 DNAJB4Q9UDY4 337 aa18.39■□□□□ 0.54
SMC4-201ENST00000344722 FAM86B1E9PN63 330 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 H0YC42 278 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 HBP1O60381 514 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 MZT2BQ6NZ67 158 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 KCNT2Q6UVM3 1135 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SLC9A9Q8IVB4 645 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 URGCPQ8TCY9 931 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 RTFDC1Q9BY42 306 aaPredicted RBP18.39■□□□□ 0.53
SMC4-201ENST00000344722 ENTPD7Q9NQZ7 604 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 GIN1Q9NXP7 522 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 TNFRSF21O75509 655 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 HMGCRP04035 888 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 ZNF57Q68EA5 555 aaPredicted RBP18.39■□□□□ 0.53
SMC4-201ENST00000344722 CES3Q6UWW8 571 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 TDRPQ86YL5 185 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SHC3Q92529 594 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 MARK4Q96L34 752 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 MECRQ9BV79 373 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SERHL2Q9H4I8 314 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SERHLQ9NQF3 203 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SLC38A7Q9NVC3 462 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 PLLPQ9Y342 182 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 DHRS12A0PJE2 317 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 EME2A4GXA9 379 aaPredicted RBP18.39■□□□□ 0.53
SMC4-201ENST00000344722 ERVK-10P10266 1014 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SLC2A4P14672 509 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 GRIA4P48058 902 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 BMT2Q1RMZ1 405 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 C1orf186Q6ZWK4 172 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 MAP4K3Q8IVH8 894 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 PRRG3Q9BZD7 231 aa18.39■□□□□ 0.53
SMC4-201ENST00000344722 SAE1Q9UBE0 346 aaPredicted RBP18.39■□□□□ 0.53
SMC4-201ENST00000344722 CCNB1P14635 433 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 LBPP18428 481 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 SPIDRQ14159 915 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 HPS6Q86YV9 775 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 FBXO39Q8N4B4 442 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 C12orf50Q8NA57 414 aaPredicted RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 APBA2Q99767 749 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 GPR63Q9BZJ6 419 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 DNAAF2Q9NVR5 837 aaKnown RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 DNAJC28Q9NX36 388 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 ROBO3Q96MS0 1386 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 PIPSLA2A3N6 862 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 CCT3P49368 545 aaKnown RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 NAGLUP54802 743 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 BBS12Q6ZW61 710 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 UBQLN1Q9UMX0 589 aaKnown RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 RPTORQ8N122 1335 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 SIGLEC16A6NMB1 481 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 TRAFD1O14545 582 aaPredicted RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 LYPLA1O75608 230 aaPredicted RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 FBXO21O94952 628 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 ASMTLO95671 621 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 ITGA2BP08514 1039 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 HIRAP54198 1017 aaPredicted RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 ZNF570Q96NI8 536 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 GINS4Q9BRT9 223 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 EBF3Q9H4W6 596 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 UBA2Q9UBT2 640 aaPredicted RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 CCDC182A6NF36 153 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 BST2Q10589 180 aaKnown RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 TRAP1Q12931 704 aaKnown RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 ANKS6Q68DC2 871 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 PHF13Q86YI8 300 aaPredicted RBP18.38■□□□□ 0.53
SMC4-201ENST00000344722 MYO1HQ8N1T3 1032 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 TUBGCP5Q96RT8 1024 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 WDR37Q9Y2I8 494 aa18.38■□□□□ 0.53
SMC4-201ENST00000344722 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 PLA2G6O60733 806 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 MMP10P09238 476 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 POU6F1Q14863 301 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 ZIK1Q3SY52 487 aaPredicted RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 C6orf89Q6UWU4 347 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 OR56A4Q8NGH8 313 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 EBNA1BP2Q99848 306 aaKnown RBP18.37■□□□□ 0.53
SMC4-201ENST00000344722 EPB41L1Q9H4G0 881 aa18.37■□□□□ 0.53
SMC4-201ENST00000344722 PIH1D1Q9NWS0 290 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms