RNA–Protein interactions for RNA: ENST00000344638.4

DEFB108F-201, Transcript of defensin beta 108F (pseudogene), humanhuman

BASIC

Gene DEFB108F, Length 222 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB108F-201ENST00000344638 CLEC17AQ6ZS10 378 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 ARHGEF18Q6ZSZ5 1173 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 HTR3DQ70Z44 454 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 PLPPR4Q7Z2D5 763 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 RNF144BQ7Z419 303 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 IQCA1Q86XH1 822 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 GSPT2Q8IYD1 628 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 OR8H3Q8N146 312 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 CARNMT1Q8N4J0 409 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 ZNF808Q8N4W9 903 aaPredicted RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 POC5Q8NA72 575 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 ZBTB8BQ8NAP8 495 aaPredicted RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 TDRD5Q8NAT2 981 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 CADM4Q8NFZ8 388 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 GABPB2Q8TAK5 448 aaPredicted RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 AFAP1L1Q8TED9 768 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 SNX21Q969T3 373 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 PGAP3Q96FM1 320 aaPredicted RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 GCNAQ96QF7 691 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 PRR25Q96S07 402 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 APOL6Q9BWW8 343 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 MRPL9Q9BYD2 267 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 ANKRD2Q9GZV1 360 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 MEGF9Q9H1U4 602 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 XAB2Q9HCS7 855 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 LTB4R2Q9NPC1 389 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 SPATS2LQ9NUQ6 558 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 IL1RAPL1Q9NZN1 696 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 MRPL15Q9P015 296 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 WDR35Q9P2L0 1181 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 MGAT4CQ9UBM8 478 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 DKK3Q9UBP4 350 aa3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 INTS6Q9UL03 887 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 CNOT6Q9ULM6 557 aaKnown RBP3.6□□□□□ -1.83
DEFB108F-201ENST00000344638 TRIM64A6NGJ6 449 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 TRIM64BA6NI03 449 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 C3orf70A6NLC5 250 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 GRXCR1A8MXD5 290 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 A8MZ25 164 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 DIRC3C9JPN6 131 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 PI4K2BG5E9Z4 385 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SNAP23O00161 211 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 AP4M1O00189 453 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 CLGNO14967 610 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SLC16A3O15427 465 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 PRAMEF2O60811 474 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 PAGE4O60829 102 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 MTA2O94776 668 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 CSPG5O95196 566 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 AFPP02771 609 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ALDOAP04075 364 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 KRT1P04264 644 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 GALTP07902 379 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 RHOP08100 348 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 CHRM4P08173 479 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 CYP4B1P13584 511 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ZNF37AP17032 561 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 GABRB1P18505 474 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 CIITAP33076 1130 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ARL1P40616 181 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 PTPN9P43378 593 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 AGTR2P50052 363 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 CLCN2P51788 898 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ZNF41P51814 821 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 VAV2P52735 878 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SLURP1P55000 103 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 RAE1P78406 368 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 FAM189BP81408 668 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SHC2P98077 582 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 FRG1Q14331 258 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 COG2Q14746 738 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 GPR162Q16538 588 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ERMARDQ5T6L9 678 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 GKAP1Q5VSY0 366 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 KIAA0930Q6ICG6 404 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 DCLRE1AQ6PJP8 1040 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 Q6ZRM9 215 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 FAM83HQ6ZRV2 1179 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SLC46A3Q7Z3Q1 461 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SLFN11Q7Z7L1 901 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 TMPRSS6Q8IU80 811 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 BRSK2Q8IWQ3 736 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ARHGAP12Q8IWW6 846 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 FUKQ8N0W3 1084 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 ARL10Q8N8L6 244 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 LINC01356Q8N9X3 169 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 IL17RCQ8NAC3 791 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SETD9Q8NE22 299 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 XAGE5Q8WWM1 108 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 POMGNT1Q8WZA1 660 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 LPIN2Q92539 896 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 VPS33AQ96AX1 596 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 BOD1Q96IK1 185 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 DCLRE1CQ96SD1 692 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 MAP7D2Q96T17 732 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 NCAPGQ9BPX3 1015 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 SRSF8Q9BRL6 282 aaKnown RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 NPLQ9BXD5 320 aaPredicted RBP3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 TRIM31Q9BZY9 425 aa3.59□□□□□ -1.83
DEFB108F-201ENST00000344638 IKZF4Q9H2S9 585 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms