RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 C11orf16Q9NQ32 467 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 ARL8BQ9NVJ2 186 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 THAP1Q9NVV9 213 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 GDAP2Q9NXN4 497 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 LRCH1Q9Y2L9 728 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 PCDHB7Q9Y5E2 793 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 USP3Q9Y6I4 520 aa11.07□□□□□ -0.64
RTN3-201ENST00000338850 A0A087WZ62 844 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 TBKBP1A7MCY6 615 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 GYG2O15488 501 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 LINC01565O15544 149 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 PAPSS1O43252 624 aaPredicted RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 XPOTO43592 962 aaKnown RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 TBX10O75333 385 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 DAB1O75553 588 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 MYL2P10916 166 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 NEFHP12036 1026 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 AOC1P19801 751 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 BGNP21810 368 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 GRK2P25098 689 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 SERPINB3P29508 390 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 PRDX6P30041 224 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 L1CAMP32004 1257 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 IRS1P35568 1242 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 MAGEA12P43365 314 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 HK2P52789 917 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 RPL26P61254 145 aaKnown RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 FAM189BP81408 668 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 ZBTB16Q05516 673 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 BST1Q10588 318 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 SF3A3Q12874 501 aaKnown RBP eCLIP11.06□□□□□ -0.64
RTN3-201ENST00000338850 ADAM15Q13444 863 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 NAA25Q14CX7 972 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 GSTA3Q16772 222 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 XKR4Q5GH76 650 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 TMEM31Q5JXX7 168 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 LRRC8BQ6P9F7 803 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 NPNTQ6UXI9 565 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 ZC3H18Q86VM9 953 aaKnown RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 LCA5Q86VQ0 697 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 TTC30AQ86WT1 665 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 CRLF3Q8IUI8 442 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 PPM1NQ8N819 430 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 GPATCH11Q8N954 259 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 ANKRD52Q8NB46 1076 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 BEST2Q8NFU1 509 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 CCDC110Q8TBZ0 833 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 POF1BQ8WVV4 589 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 THOC1Q96FV9 657 aaKnown RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 FDXACB1Q9BRP7 624 aaPredicted RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 TRIM6Q9C030 488 aaPredicted RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 BRD8Q9H0E9 1235 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 ELAC1Q9H777 363 aaKnown RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 ARHGEF4Q9NR80 690 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.06□□□□□ -0.64
RTN3-201ENST00000338850 TMEM161AQ9NX61 479 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 IGSF9Q9P2J2 1179 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 TAGLN3Q9UI15 199 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 ANGPTL2Q9UKU9 493 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 AKT3Q9Y243 479 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 FAM50BQ9Y247 325 aa11.06□□□□□ -0.64
RTN3-201ENST00000338850 HBS1LQ9Y450 684 aaKnown RBP11.06□□□□□ -0.64
RTN3-201ENST00000338850 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 A0A0G2JND7 137 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 FAM86C2PA6NEL3 165 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 ERI2A8K979 691 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 GPR37L1O60883 481 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 PSMG1O95456 288 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 PGAM1P18669 254 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 PTDSS1P48651 473 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 CLCN2P51788 898 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 OSTNP61366 133 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 ZP2Q05996 745 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 SLC34A1Q06495 639 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 C15orf59Q2T9L4 293 aaPredicted RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 INTS6LQ5JSJ4 861 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 EFHC1Q5JVL4 640 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 C6orf163Q5TEZ5 329 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 HEATR6Q6AI08 1181 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 PMF1Q6P1K2 205 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 AAGABQ6PD74 315 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 DPH6Q7L8W6 267 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 ADGRD2Q7Z7M1 963 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 PRPF39Q86UA1 669 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 STKLD1Q8NE28 680 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 DNAJC9Q8WXX5 260 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 NT5C3BQ969T7 300 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 MCUR1Q96AQ8 359 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 FAM136AQ96C01 138 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 RNF19AQ9NV58 838 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 TAS2R1Q9NYW7 299 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 NKX1-2Q9UD57 310 aaPredicted RBP11.05□□□□□ -0.64
RTN3-201ENST00000338850 DCDC2Q9UHG0 476 aa11.05□□□□□ -0.64
RTN3-201ENST00000338850 DCTN4Q9UJW0 460 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms