RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CCDC66A2RUB6 948 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 GRID2IPA4D2P6 1211 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 PRRT4C9JH25 899 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 NPC1O15118 1278 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 ZRANB2O95218 330 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 ASLP04424 464 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 GOT1P17174 413 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 ERCC2P18074 760 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 KDELR1P24390 212 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 HOXC13P31276 330 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 NNMTP40261 264 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 CETN2P41208 172 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 CSKP41240 450 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 IRAK1P51617 712 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 YBEYP58557 167 aaPredicted RBP12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 SULT2A1Q06520 285 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 FZD5Q13467 585 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 HSF5Q4G112 596 aaPredicted RBP12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 PITRM1Q5JRX3 1037 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 MBLAC2Q68D91 279 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 CXorf57Q6NSI4 855 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 TRMT11Q7Z4G4 463 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 NLRP14Q86W24 1093 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 LZTR1Q8N653 840 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 UBL4BQ8N7F7 174 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 LRRC57Q8N9N7 239 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 FAM71BQ8TC56 605 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 WFDC5Q8TCV5 224 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 TTC17Q96AE7 1141 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 LMLNQ96KR4 655 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 ALS2CR12Q96Q35 445 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 IER2Q9BTL4 223 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 SPON2Q9BUD6 331 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 MAGEH1Q9H213 219 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 GOLPH3Q9H4A6 298 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 PRDM16Q9HAZ2 1276 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 RBM12Q9NTZ6 932 aaKnown RBP12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 DNAI1Q9UI46 699 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 VPS28Q9UK41 221 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 HPCAL4Q9UM19 191 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 PCDHA3Q9Y5H8 950 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 C5orf42Q9H799 3197 aa12.23□□□□□ -0.45
SPTLC1-202ENST00000337841 HELZP42694 1942 aaKnown RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 LRRD1A4D1F6 860 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 GOLGA6L9A6NEM1 432 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 PRR33A8MZF0 331 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 MIF4GDA9UHW6 222 aaKnown RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 PI15O43692 258 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 RAMP2O60895 175 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 RNF40O75150 1001 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 KRT1P04264 644 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 DCNP07585 359 aaKnown RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 HNRNPLP14866 589 aaKnown RBP eCLIP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 AMPD1P23109 780 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 CTNNA2P26232 953 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 MZF1P28698 734 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 TIE1P35590 1138 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ARSEP51690 589 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 NDST2P52849 883 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 SEC13P55735 322 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ST8SIA6P61647 398 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ECT2LQ008S8 904 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 GNA12Q03113 381 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 MESP2Q0VG99 397 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 POLD3Q15054 466 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 PLEKHG6Q3KR16 790 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 C2orf27AQ580R0 203 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ARTNQ5T4W7 220 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 EMC10Q5UCC4 262 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 TMCO3Q6UWJ1 677 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 NT5DC3Q86UY8 548 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ADIPOR2Q86V24 386 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 VSIG1Q86XK7 387 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 APCDD1Q8J025 514 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 UMODL1-AS1Q8N2C9 162 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF513Q8N8E2 541 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 USP33Q8TEY7 942 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 RAPGEF5Q92565 580 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF670Q9BS34 389 aa12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 TRMT1Q9NXH9 659 aaKnown RBP12.22□□□□□ -0.45
SPTLC1-202ENST00000337841 FAM86C2PA6NEL3 165 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ZNF487B1APH4 448 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 CHURC1-FNTBB4DL54 471 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 SRPRAP08240 638 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 DLDP09622 509 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 ZFXP17010 805 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 IL4RP24394 825 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 MSNP26038 577 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 AVPR2P30518 371 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 CTNNA1P35221 906 aaKnown RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 RWDD2BP57060 319 aa12.21□□□□□ -0.45
SPTLC1-202ENST00000337841 SLC20A2Q08357 652 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms