RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 ITGAVP06756 1048 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 PDGFRAP16234 1089 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 GOT1P17174 413 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 C5AR1P21730 350 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 BMP6P22004 513 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 CCR5P51681 352 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 ADPRHP54922 357 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 YWHAZP63104 245 aaKnown RBP25.17■■□□□ 1.62
CDKN3-202ENST00000335183 PITX1P78337 314 aaPredicted RBP25.17■■□□□ 1.62
CDKN3-202ENST00000335183 SMAD1Q15797 465 aaKnown RBP25.17■■□□□ 1.62
CDKN3-202ENST00000335183 CIR1Q86X95 450 aaPredicted RBP25.17■■□□□ 1.62
CDKN3-202ENST00000335183 STK32AQ8WU08 396 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 ZNF606Q8WXB4 792 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 SERAC1Q96JX3 654 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 MED15Q96RN5 788 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 ACP6Q9NPH0 428 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 DKK4Q9UBT3 224 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 SLC12A6Q9UHW9 1150 aa25.17■■□□□ 1.62
CDKN3-202ENST00000335183 SYNJ2BP-COX16A0A087WUM0 186 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 CBX4O00257 560 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 BIN1O00499 593 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 ENC1O14682 589 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 GNA14O95837 355 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 MZF1P28698 734 aaPredicted RBP25.16■■□□□ 1.62
CDKN3-202ENST00000335183 GNA15P30679 374 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 CAMK2BQ13554 666 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP25.16■■□□□ 1.62
CDKN3-202ENST00000335183 CNDP2Q96KP4 475 aaKnown RBP25.16■■□□□ 1.62
CDKN3-202ENST00000335183 FAM204AQ9H8W3 233 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 GDF3Q9NR23 364 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.16■■□□□ 1.62
CDKN3-202ENST00000335183 COX16Q9P0S2 106 aa25.16■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3DA0A087WVF3 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3IA0A087WXS9 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3EA0A087X179 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3KA0A087X1G2 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 A0A1W2PR77 199 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3FA6NER0 549 aaPredicted RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 KCNU1A8MYU2 1149 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3LB9A6J9 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 LDOC1O95751 146 aaPredicted RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 IGLV3-25P01717 112 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3HP0C7X1 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 VAV1P15498 845 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 SLC12A1Q13621 1099 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 ELAVL3Q14576 367 aaKnown RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 SHBQ15464 509 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 SLC45A4Q5BKX6 768 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3GQ6DHY5 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3CQ6IPX1 549 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 FOXR2Q6PJQ5 311 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TMEM110Q86TL2 294 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 ELOA2Q8IYF1 753 aaPredicted RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 TBC1D3Q8IZP1 549 aaPredicted RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 CCAR2Q8N163 923 aaKnown RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 PDCD7Q8N8D1 485 aaKnown RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 LRIG1Q96JA1 1093 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 SRRTQ9BXP5 876 aaKnown RBP25.15■■□□□ 1.62
CDKN3-202ENST00000335183 THAP9Q9H5L6 903 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 MYLKQ15746 1914 aa25.15■■□□□ 1.62
CDKN3-202ENST00000335183 PPP2CBP62714 309 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 PPP2CAP67775 309 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 SULT2A1Q06520 285 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 PAK1Q13153 545 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 DNAJC3Q13217 504 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 PDCLQ13371 301 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 MORC3Q14149 939 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 TAF5Q15542 800 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 MEA1Q16626 185 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 RABGAP1LQ5R372 815 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 EID2Q8N6I1 236 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 SAP25Q8TEE9 199 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 RNF34Q969K3 372 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 SCUBE2Q9NQ36 999 aa25.14■■□□□ 1.62
CDKN3-202ENST00000335183 LAMA5O15230 3695 aa25.14■■□□□ 1.61
CDKN3-202ENST00000335183 NBEAQ8NFP9 2946 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 PLK4O00444 970 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 DRD3P35462 400 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 USP8P40818 1118 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 ARRB1P49407 418 aaPredicted RBP25.13■■□□□ 1.61
CDKN3-202ENST00000335183 METAP1P53582 386 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 MARSP56192 900 aaKnown RBP25.13■■□□□ 1.61
CDKN3-202ENST00000335183 CLDN6P56747 220 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 TMPRSS12Q86WS5 348 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 DEFB106AQ8N104 65 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 SPAG5Q96R06 1193 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 PRMT1Q99873 361 aaKnown RBP25.13■■□□□ 1.61
CDKN3-202ENST00000335183 DDIT4Q9NX09 232 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 ITPR1Q14643 2758 aa25.13■■□□□ 1.61
CDKN3-202ENST00000335183 KNTC1P50748 2209 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 A0A1B0GVM2 712 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 TCAF2A6NFQ2 919 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 YKT6O15498 198 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 EPHA8P29322 1005 aaPredicted RBP25.12■■□□□ 1.61
CDKN3-202ENST00000335183 CDK17Q00537 523 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 ACCSLQ4AC99 568 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 SOWAHCQ53LP3 525 aaPredicted RBP25.12■■□□□ 1.61
CDKN3-202ENST00000335183 TTC39BQ5VTQ0 682 aaPredicted RBP25.12■■□□□ 1.61
CDKN3-202ENST00000335183 GJB7Q6PEY0 223 aa25.12■■□□□ 1.61
CDKN3-202ENST00000335183 CRACR2AQ9BSW2 395 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms