RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 LMAN2Q12907 356 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 SLC10A2Q12908 348 aaPredicted RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 ZNF177Q13360 481 aaPredicted RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 PAFAH1B3Q15102 231 aaKnown RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 SLC44A4Q53GD3 710 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 SETD3Q86TU7 594 aaPredicted RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 NETO2Q8NC67 525 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 XPO6Q96QU8 1125 aaKnown RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 OSBPL9Q96SU4 736 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 LRRC19Q9H756 370 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 INTS6Q9UL03 887 aaKnown RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 SLC27A6Q9Y2P4 619 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
CHGA-202ENST00000334654 NYNRINQ9P2P1 1898 aaKnown RBP17.97■□□□□ 0.47
CHGA-202ENST00000334654 TCRBV7S2A1N4TA0A589 114 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 CTAGE9A4FU28 777 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 GLULP15104 373 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 PRLRP16471 622 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 MZF1P28698 734 aaPredicted RBP17.96■□□□□ 0.47
CHGA-202ENST00000334654 EIF2DP41214 584 aaKnown RBP17.96■□□□□ 0.47
CHGA-202ENST00000334654 KLF1Q13351 362 aaPredicted RBP17.96■□□□□ 0.47
CHGA-202ENST00000334654 ODF2Q5BJF6 829 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 KAZNQ674X7 775 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 BBS12Q6ZW61 710 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 RFX6Q8HWS3 928 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.96■□□□□ 0.47
CHGA-202ENST00000334654 COG1Q8WTW3 980 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 C8orf33Q9H7E9 229 aaPredicted RBP17.96■□□□□ 0.47
CHGA-202ENST00000334654 ABCB8Q9NUT2 735 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 DNAJC17Q9NVM6 304 aaKnown RBP17.96■□□□□ 0.47
CHGA-202ENST00000334654 MUTYHQ9UIF7 546 aa17.96■□□□□ 0.47
CHGA-202ENST00000334654 MYO18AQ92614 2054 aaKnown RBP17.96■□□□□ 0.47
CHGA-202ENST00000334654 A0A0D9SEW6 157 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 ILVBLA1L0T0 632 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 CST8O60676 142 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 DGKGP49619 791 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 GALK1P51570 392 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 PLK1P53350 603 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 GBE1Q04446 702 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 CDH18Q13634 790 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 TMEM215Q68D42 235 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 TMCO3Q6UWJ1 677 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 NPNTQ6UXI9 565 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 RALGPS2Q86X27 583 aaPredicted RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 SFTPA1Q8IWL2 248 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 RASGEF1CQ8N431 466 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 CELF6Q96J87 481 aaKnown RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 PBKQ96KB5 322 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 MAK16Q9BXY0 300 aaKnown RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 SLC39A8Q9C0K1 460 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 PRDM16Q9HAZ2 1276 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 DEC1Q9P2X7 70 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 A0A0A0MRY4 1105 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 APOL1O14791 398 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 ZNF185O15231 689 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 MFSD11O43934 449 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 CASQ1P31415 396 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 ACVRL1P37023 503 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 CSKP41240 450 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 NDST2P52849 883 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 GNA12Q03113 381 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 TFDP2Q14188 446 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 GEN1Q17RS7 908 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 C6orf118Q5T5N4 469 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 SEL1L2Q5TEA6 688 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 RNF219Q5W0B1 726 aaPredicted RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 APCDD1Q8J025 514 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 LZTR1Q8N653 840 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 OR7D4Q8NG98 312 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 EZH1Q92800 747 aaPredicted RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 ARHGEF2Q92974 986 aaKnown RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 FEM1AQ9BSK4 669 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 MAGEH1Q9H213 219 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 DTLQ9NZJ0 730 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 KIAA1522Q9P206 1035 aaPredicted RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 SAE1Q9UBE0 346 aaPredicted RBP17.95■□□□□ 0.46
CHGA-202ENST00000334654 WNT16Q9UBV4 365 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 GGA2Q9UJY4 613 aa17.95■□□□□ 0.46
CHGA-202ENST00000334654 ATG2BQ96BY7 2078 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 KRBA1A5PL33 1030 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 ANTXRLA6NF34 631 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 RASA4BC9J798 803 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 CES2O00748 559 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 RASA4O43374 803 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 CEP104O60308 925 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 TUBB4AP04350 444 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 RHOCP08134 193 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 PABPC1P11940 636 aaKnown RBP17.94■□□□□ 0.46
CHGA-202ENST00000334654 PECAM1P16284 738 aaPredicted RBP17.94■□□□□ 0.46
CHGA-202ENST00000334654 YBEYP58557 167 aaPredicted RBP17.94■□□□□ 0.46
CHGA-202ENST00000334654 DYNLT1P63172 113 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 PLEKHG6Q3KR16 790 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 FUT11Q495W5 492 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 GRAMD4Q6IC98 578 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 ZNF783Q6ZMS7 281 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 ADIPOR2Q86V24 386 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 SLC13A5Q86YT5 568 aaPredicted RBP17.94■□□□□ 0.46
CHGA-202ENST00000334654 UBALD2Q8IYN6 164 aa17.94■□□□□ 0.46
CHGA-202ENST00000334654 ZNF557Q8N988 423 aaPredicted RBP17.94■□□□□ 0.46
CHGA-202ENST00000334654 MS4A14Q96JA4 679 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms