RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
PDGFB-201ENST00000331163 ZNF572Q7Z3I7 529 aaPredicted RBP16.27■□□□□ 0.2
PDGFB-201ENST00000331163 GRASPQ7Z6J2 395 aaPredicted RBP16.27■□□□□ 0.2
PDGFB-201ENST00000331163 C4orf33Q8N1A6 199 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 OR7D4Q8NG98 312 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 STK32AQ8WU08 396 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 CCT6BQ92526 530 aa16.27■□□□□ 0.2
PDGFB-201ENST00000331163 MRPS23Q9Y3D9 190 aaKnown RBP16.27■□□□□ 0.2
PDGFB-201ENST00000331163 MTA2O94776 668 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 ARL1P40616 181 aaPredicted RBP16.27■□□□□ 0.19
PDGFB-201ENST00000331163 NRIP1P48552 1158 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 FAM189BP81408 668 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 SHHQ15465 462 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 TMC3Q7Z5M5 1100 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 POLNQ7Z5Q5 900 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 MREGQ8N565 214 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 P2RY11Q96G91 374 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 SLC22A12Q96S37 553 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 EMILIN2Q9BXX0 1053 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 ANLNQ9NQW6 1124 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 DTLQ9NZJ0 730 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 CFAP97Q9P2B7 532 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 EME2A4GXA9 379 aaPredicted RBP16.27■□□□□ 0.19
PDGFB-201ENST00000331163 GRM6O15303 877 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 INPPL1O15357 1258 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.19
PDGFB-201ENST00000331163 CSH1P0DML2 217 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 CSH2P0DML3 217 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 PPM1AP35813 382 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 GPR158Q5T848 1215 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 SCD5Q86SK9 330 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 SLC13A1Q9BZW2 595 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 ECT2Q9H8V3 914 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 ASAH2Q9NR71 780 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 NDFIP2Q9NV92 336 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 DNMT3LQ9UJW3 386 aa16.27■□□□□ 0.19
PDGFB-201ENST00000331163 CCL22O00626 93 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 TGM5O43548 720 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 MT-CYBP00156 380 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-201ENST00000331163 EPCAMP16422 314 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 GPM6BQ13491 265 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 AUHQ13825 339 aaKnown RBP16.26■□□□□ 0.19
PDGFB-201ENST00000331163 TNS4Q8IZW8 715 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 FBXO36Q8NEA4 188 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 RAD9AQ99638 391 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 ZCWPW1Q9H0M4 648 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 FGFR1OP2Q9NVK5 253 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-201ENST00000331163 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 H0Y3Z8 333 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 OAZ2O95190 189 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 PDHA1P08559 390 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 SLC10A2Q12908 348 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-201ENST00000331163 ZNF177Q13360 481 aaPredicted RBP16.26■□□□□ 0.19
PDGFB-201ENST00000331163 SLMAPQ14BN4 828 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 NUGGCQ68CJ6 796 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 LRIG3Q6UXM1 1119 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 ZNF366Q8N895 744 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 PNPLA1Q8N8W4 532 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 NPY6RQ99463 290 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 CATSPERBQ9H7T0 1116 aa16.26■□□□□ 0.19
PDGFB-201ENST00000331163 H0YGN5 161 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 RAMP2O60895 175 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 FYNP06241 537 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 INHBAP08476 426 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 PKDCCQ504Y2 493 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 PPP1R15BQ5SWA1 713 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 CAPRIN2Q6IMN6 1127 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 CD300LGQ6UXG3 332 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 BZW1Q7L1Q6 419 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 GET4Q7L5D6 327 aaPredicted RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 STRADAQ7RTN6 431 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 TRPM8Q7Z2W7 1104 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 FNIP1Q8TF40 1166 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 TMA16Q96EY4 203 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 IPO11Q9UI26 975 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 NFS1Q9Y697 457 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 NCOR1O75376 2440 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ZFXP17010 805 aaPredicted RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 PDE1BQ01064 536 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 POLD3Q15054 466 aaPredicted RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ATP13A1Q9HD20 1204 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ZC3H7BQ9UGR2 993 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ATXN2Q99700 1313 aaKnown RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 IRAK2O43187 625 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ATF6P18850 670 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ITIH2P19823 946 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ECHS1P30084 290 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 PRPSAP1Q14558 356 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ALFQ53S48 1182 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 TMEM240Q5SV17 173 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 CMASQ8NFW8 434 aaPredicted RBP16.25■□□□□ 0.19
PDGFB-201ENST00000331163 BLOC1S5Q8TDH9 187 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ARMC5Q96C12 935 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ZFYVE19Q96K21 471 aa16.25■□□□□ 0.19
PDGFB-201ENST00000331163 ELAC1Q9H777 363 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms